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Name : VEA_001890 (VEA_001890) Accession : YP_003284518.1 Strain : Genome accession: NC_013456 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 278122 - 279339 bp Length : 1218 bp Strand : - Note : - DNA sequence : ATGGCGGCATTTGAGTACAAAGCGCTAGATGCAAAAGGCAAGCATAAAAAAGGCACGATAGAAGGGGACAACGCCCGACA AGTGCGCCAGCGACTCAAAGAGCAAGGGATGATCCCGATTGAAGTGGTCGAGACGAAAGCTAAATCGGCTAAGTCTTCAG GTTCAGTCAGCTTTAAGCGCGGCATCTCAACATCTGAGCTGGCACTAATCACACGTCAATTGTCCACGTTAGTCCAATCA GGTATGCCTTTGGAAGAATGTTTGCGTGCTGTCTCTGAGCAGGCTGAAAAGCCGAGAATTCGTTCTATGCTGGCTGCGGT TCGCTCGAAAGTAACCGAGGGTTATCCGCTCGCCGACAGTTTTGCTGATTACCCACACGTGTTTGATGAACTCTATCGCT CCATGGTTGCGGCGGGTGAAAAGTCAGGCCATCTTGATACGGTATTAGAGCGTTTGGCGGACTACGTCGAAAACCGTCAG AAGATGCGTTCCAAACTGCTTCAAGCCATGATCTACCCGGTGGTTTTGGTGGTGTTTGCGGTTGTTATTGTTTCTTTCTT ATTAGCGACAGTGGTACCCAAAATTATTGAGCCAATCATTCAGATGGGACAAGAGTTACCTCAGTCAACGCAGTTCTTAC TGGCAGCCAGTGAGTTTGTGCAAGATTGGGGGCTTATCATCTTCGTCGTGCTGGTGGTGTTTTTCTATGTGCTCAAACTG GCGTTGCAAAAACCAGACTTTCGCTTAGCTTGGGATAGAAAAATCTTGAGCCTACCGCTATTAGGCAAAATCTCTCGAGG TTTGAATACCGCACGATTCGCACGAACACTTTCGATTTGTACTTCCAGTGCGATTCCAATTCTAGAAGGCATGCGCGTTG CGGTGGATGTTATGTCTAATCGCTATGTGAAGCAGCAAGTATTGCTTGCTGCGGATAACGTTCGAGAAGGTGCCAGCCTG CGTAAGGCGTTGGATCAAACTCGTCTGTTTCCACCAATGATGCTACACATGATCGCCAGTGGTGAGCAAAGTGGTGAATT GGAGAGCATGTTGACGCGTGCTGCCGATAACCAAGATCAAAACTTTGAATCTACAGTCAATATTGCGCTAGGTGTATTCA CTCCGGCATTAATTGCCTTAATGGCTGGATTAGTGTTGTTTATTGTGATGGCGACCTTGATGCCAATGCTAGAAATGAAT AACTTGATGAGCGGATAA Protein sequence : MAAFEYKALDAKGKHKKGTIEGDNARQVRQRLKEQGMIPIEVVETKAKSAKSSGSVSFKRGISTSELALITRQLSTLVQS GMPLEECLRAVSEQAEKPRIRSMLAAVRSKVTEGYPLADSFADYPHVFDELYRSMVAAGEKSGHLDTVLERLADYVENRQ KMRSKLLQAMIYPVVLVVFAVVIVSFLLATVVPKIIEPIIQMGQELPQSTQFLLAASEFVQDWGLIIFVVLVVFFYVLKL ALQKPDFRLAWDRKILSLPLLGKISRGLNTARFARTLSICTSSAIPILEGMRVAVDVMSNRYVKQQVLLAADNVREGASL RKALDQTRLFPPMMLHMIASGEQSGELESMLTRAADNQDQNFESTVNIALGVFTPALIALMAGLVLFIVMATLMPMLEMN NLMSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-96 | 54 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-95 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VEA_001890 | YP_003284518.1 | general secretion pathway protein F | VFG2049 | Protein | 3e-91 | 53 |
| VEA_001890 | YP_003284518.1 | general secretion pathway protein F | VFG0181 | Protein | 2e-82 | 48 |
| VEA_001890 | YP_003284518.1 | general secretion pathway protein F | VFG1870 | Protein | 5e-72 | 42 |
