|
Name : VEA_003809 (VEA_003809) Accession : YP_003286434.1 Strain : Genome accession: NC_013456 Putative virulence/resistance : Resistance Product : transporter AcrB/D/F family Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 2438150 - 2441260 bp Length : 3111 bp Strand : - Note : - DNA sequence : ATGAGCGATCTTAATAAATCAGTGCCTCAAAGTGATGATGATGTGACCGGTATTGCTGCGTACTTCATCCGAAATCGTGT CATCAGTTGGATGGTCGCACTGATCTTTTTGATTGGTGGTATCGCTGCATTCTTTGGGTTAGGGCGTCTTGAAGACCCTG CTTTTACCATCAAAGATGCCATGGTGGTGACCTCTTACCCTGGTGCGACGCCGCAACAAGTCGAAGAAGAAGTGACTTAT CCGATCGAAAAAGCGATTCAGCAGCTTACTTATGTTGATGAAGTGAATTCGATTTCTAGCCGAGGATTATCGCAAATCAC GGTCACGATGAAGAACAATTATGGCCCTGATGATCTGCCACAAATCTGGGATGAGTTACGCCGTAAAGTGAATGACCTTA AAGGGACGTTGCCTCCGGGTGTGAATGAACCTCAAGTGATCGATGATTTTGGTGATGTTTACGGGATTTTGTTAGCGGTG ACTGGCGACGGTTATAGCTATAAGGAGCTACTGGATTACGTCGATTACTTACGCCGAGAGCTCGAACTGGTTGATGGAGT GAGCAAAGTTTCGGTATCCGGGCAGCAGCAAGAGCAAGTTTTCATCGAAGTATCGATGAAAAAGCTGAGCAGTATAGGAC TTTCTCCCGATACGGTCTTTAATCTTCTCTCGACGCAAAACGTGGTTTCTGACGCAGGGGCGATCAGAATTGGTGACGAG TACATCAGAATTCAGCCGACTGGCGAATTCCAGAGTGTGGATGAGCTAGGCGATTTGTTGATTACTGAGTCGGGAGCTCA GGGGCTCATCTTCTTGAAAGATGTGGCGGAAATAAAACGTGGGTATGTAGAAGTACCGAGTAATATTATTAATTTTAACG GCAGCCTCGCACTGAACGTGGGTGTTTCTTTTGCTGAAGGTGTCAACGTCGTTGAAGTCGGAAAAGCATTTGATCATCGC CTTGCCGAGCTAAAGTACCAACAACCTGTCGGTATCGAAATTTCCGAAATTTACAGTCAGCCTAAAGAGGTGGATAAATC GGTTAGCGGTTTTGTTGTCAGCTTGGCTCAAGCTGTCGGTATCGTCATTATCGTACTTCTGTTCTTTATGGGGCTACGTT CAGGTCTGCTTATCGGTTTAATTTTACTGCTGACGGTGTTGGGTACGTTCATTTTCATGAAGTATCTCGCGATAGATTTG CAGCGGATTTCATTAGGTGCTTTGGTTATCGCGTTAGGTATGCTGGTGGACAATGCAATCGTCGTGGTTGAGGGGATTTT GATTGGTACCCAAAAAGGGCGAACTCGACTCCAAGCGGCGACTGATATCGTTACCCAAACCAAGTGGCCATTACTTGGGG CAACTGTGATTGCGGTAACTGCATTTGCGCCCATTGGACTGTCTGAAGACTCGACGGGTGAATACTGTGGCACTTTGTTT ACGGTTCTGCTGATCTCATTGATGTTGAGTTGGTTTACCGCTATCTCGTTGACACCATTCTTTGCTGACATCTTCTTTAA AGGCCAGAAGATTAAACAAGGTGAAGGGGAAGAAAATGATCCATATAACGGGGTTATTTTCGTTATTTATAAAAAGTTTC TTCAGTTTTGTATGCGTCGTGCTTGGTTTACCGTTGTGGTGCTGATTGCGGGATTAGCGGCAAGTGTTTACGGGTTCACC TTTGTGAAGCAAGCGTTTTTCCCATCTTCGACAACGCCGATTTTTCAGTTAGATGTATGGATGCCAGAAGGAACTGATAT TCGAGCAACCAACACAACGCTTAAAGAGTTAGAAAGTTGGTTAGCTAAGCAAGAGCATGTTGACCATATCACGACGACCG CGGGTAAAGGCTTACAGCGCTTCATGTTAACGTACGCGCCCGAGAAAAGTTATGCGGCTTATGGTGAGATAACCACTCGT ATGGAAAATTACGAAGCGTTGAAACCATTAATGGCGAAGTTTCGAGAGTATTTAAAAGCCAACTACCCAGAAATCAATTA CAAGCTCAAACAGATTGAGTTAGGTCCAGGTGGTGGTGCAAAAATTGAAGCGCGCATTATTGGCTCTGATCCAACCGTCC TTCGTACGATAGCCGCTCAGGTCAAGGACATCATGTACGCCGATCCTCAGGCAACAAATATCAGGCATGATTGGCGTGAA CGAACCCAAGTTCTTGAGCCTCAGTTTAATGAGAGTCAGGCACGTCGCTATGGCATTACAAAATCAGATGTCGATGACTT CTTGTCCATGTCATTCTCTGGAATGACGATAGGCCTTTACCGAGACGGCACGACGCTCATGCCTATCGTGGCTCGCTTAC CTGAAGATGAACGCATCGATATTCGTAACATTGAAGGCATGAAAATATGGAGTCCAGCACAGAGTGAGTTTATCCCACTT CAACAAGTCACAATGGGTTACGACATGCGTTGGGAGGATCCTATCATCGTACGTAAGAACCGTAAGCGTATGCTCACTGT GATGGCAGACCCTGATATTCTTGGTGAAGAAACCGCATCGACGTTGCAAAAACGTTTACAGCCCCAAATCGAAGCGATTC AAATGCCTCCTGGCTATTCACTAGAATGGGGGGGGGAATACGAATCTTCAGGTGATGCTCAAGAGTCGCTGTTTACTACC ATGCCAATGGGGTACTTGTTCATGTTCTTGATCACCGTATTCCTATTTAACTCTATCAAAGAGCCACTCATTGTTTGGCT TACCGTGCCGTTGGCGTTAATTGGTGTCACCACCGGTTTGTTAGCACTCAACACGCCGTTTGGTTTTATGGCTTTGCTCG GCTTCTTAAGCTTATCGGGAATGGTGCTCAAAAATGGCATCGTATTACTGGACCAAATTGAAATAGAAATGAAATCAGGT AAAGAGGCTTATGATGCGGTCGTTGATGCTGCGGTAAGCCGTGTTCGTCCTGTGTGTATGGCTGCAATCACGACGATCCT TGGTATGATCCCACTATTACCAGATATTTTCTTCAAACCAATGGCGGTTACGATTATGTTTGGTTTGGGCTTTGCGACAG TCCTGACACTGATTGTCGTGCCAGTGTTGTATCGTTTGTTCCATAAAGTGGCAGTACCGAAACAGGCTTAG Protein sequence : MSDLNKSVPQSDDDVTGIAAYFIRNRVISWMVALIFLIGGIAAFFGLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEVTY PIEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGTLPPGVNEPQVIDDFGDVYGILLAV TGDGYSYKELLDYVDYLRRELELVDGVSKVSVSGQQQEQVFIEVSMKKLSSIGLSPDTVFNLLSTQNVVSDAGAIRIGDE YIRIQPTGEFQSVDELGDLLITESGAQGLIFLKDVAEIKRGYVEVPSNIINFNGSLALNVGVSFAEGVNVVEVGKAFDHR LAELKYQQPVGIEISEIYSQPKEVDKSVSGFVVSLAQAVGIVIIVLLFFMGLRSGLLIGLILLLTVLGTFIFMKYLAIDL QRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDSTGEYCGTLF TVLLISLMLSWFTAISLTPFFADIFFKGQKIKQGEGEENDPYNGVIFVIYKKFLQFCMRRAWFTVVVLIAGLAASVYGFT FVKQAFFPSSTTPIFQLDVWMPEGTDIRATNTTLKELESWLAKQEHVDHITTTAGKGLQRFMLTYAPEKSYAAYGEITTR MENYEALKPLMAKFREYLKANYPEINYKLKQIELGPGGGAKIEARIIGSDPTVLRTIAAQVKDIMYADPQATNIRHDWRE RTQVLEPQFNESQARRYGITKSDVDDFLSMSFSGMTIGLYRDGTTLMPIVARLPEDERIDIRNIEGMKIWSPAQSEFIPL QQVTMGYDMRWEDPIIVRKNRKRMLTVMADPDILGEETASTLQKRLQPQIEAIQMPPGYSLEWGGEYESSGDAQESLFTT MPMGYLFMFLITVFLFNSIKEPLIVWLTVPLALIGVTTGLLALNTPFGFMALLGFLSLSGMVLKNGIVLLDQIEIEMKSG KEAYDAVVDAAVSRVRPVCMAAITTILGMIPLLPDIFFKPMAVTIMFGLGFATVLTLIVVPVLYRLFHKVAVPKQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 0.0 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VEA_003809 | YP_003286434.1 | transporter AcrB/D/F family | BAC0519 | Protein | 0.0 | 97 |
| VEA_003809 | YP_003286434.1 | transporter AcrB/D/F family | BAC0428 | Protein | 0.0 | 86 |
| VEA_003809 | YP_003286434.1 | transporter AcrB/D/F family | BAC0526 | Protein | 0.0 | 58 |
| VEA_003809 | YP_003286434.1 | transporter AcrB/D/F family | BAC0425 | Protein | 0.0 | 44 |
