Gene Information

Name : VEA_003543 (VEA_003543)
Accession : YP_003286168.1
Strain :
Genome accession: NC_013456
Putative virulence/resistance : Virulence
Product : lipopolysaccharide synthesis sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 2131283 - 2131921 bp
Length : 639 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAACTCACGCTACGATTCAAATGTATGCCACGCGAAAAGAACGTTTGATGTACTGGTTGCAATGTTTATTTTGCT
CGTCACTGCACCACTATTCCCATTTATCGCGCTAGCTATAAAAATCACATCGAAAGGCCCAGTGATCTATCGTCAACTGC
GTGTTGGGCGCTGTACACCAGAAAAAATGGATCTTTTTCAAATCATGAAGTTTCGCACCATGTATATTGATGCGGAGCAA
CGCTCCGGTGCAGTTTGGGCAACCGAGAATGATCCTCGAATCACACCAATAGGACGTTTTTTACGTAAGACGCGTTTAGA
TGAGTTACCACAGCTGTTTAATGTGTTGAGAGGTGAAATGTCGATGATCGGGCCACGTCCAGAGCGCCCTGCTTTCTACC
AAAAGTTGGAAGATGAAATCCCTTATTTTGTAGAACGCACATATGGCGTATTACCAGGAATTACAGGCCTAGCACAAGTT
AACCAAGGCTATGATGCTTGCATTGAAGATGTGCGACGTAAAGTTGGGTTTGATCACAGTTACGCACTAAGCTTAGGTTC
GTTCTACTCTTGGATTTCAATGGACCTTTCAATCATGAGCAAAACATTCGTTGTGATGATTGACGGACGAGGTCAGTAA

Protein sequence : 
MKNSRYDSNVCHAKRTFDVLVAMFILLVTAPLFPFIALAIKITSKGPVIYRQLRVGRCTPEKMDLFQIMKFRTMYIDAEQ
RSGAVWATENDPRITPIGRFLRKTRLDELPQLFNVLRGEMSMIGPRPERPAFYQKLEDEIPYFVERTYGVLPGITGLAQV
NQGYDACIEDVRRKVGFDHSYALSLGSFYSWISMDLSIMSKTFVVMIDGRGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 9e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEA_003543 YP_003286168.1 lipopolysaccharide synthesis sugar transferase VFG1309 Protein 5e-20 41