Gene Information

Name : VEA_003376 (VEA_003376)
Accession : YP_003286001.1
Strain :
Genome accession: NC_013456
Putative virulence/resistance : Virulence
Product : type III secretion chaperone protein for YopD (SycD)
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG5010
EC number : -
Position : 1931501 - 1931986 bp
Length : 486 bp
Strand : +
Note : -

DNA sequence : 
ATGACTAAACAAAACGCGACCGATCCATCTCAAATGCAAGCAGAAGAACTGCTGTCTTTTTTGGAAGAGGGAGGCACGCT
AAAAATGTTGCACGATGTGTCTCAGAACACCATCGAACACATTTATGCCGTAGGTTACAACTTTTTCCAGTCGGGAAAGA
TTGAGCAAGCAGCGAAAGTATTTCAATTACTCAGCATGCTTGATCATTATCAGGCGCGATTTTTCATTGGCCTTGGCGCG
GCTCGTCAGGAGTTGGGTGAGTATCTGCAGGCAATAGACGCCTACAGCTACGCAGCGCTAGTGGACGTAAATGATCCACG
CCCACCTTTTCACTCTGCTGAATGTCACCTGAAACTGGAACAACTGACAGAAGCAGAGAGTGGGTTTTACAGCGCGAAGG
AGATGTCTGCCGGAAAATCACAATATGCAGATTTGCATGAGCGTGCAGGCATCATGTTAGAAGCGGTGAGAAATAAAAAG
GAGTAA

Protein sequence : 
MTKQNATDPSQMQAEELLSFLEEGGTLKMLHDVSQNTIEHIYAVGYNFFQSGKIEQAAKVFQLLSMLDHYQARFFIGLGA
ARQELGEYLQAIDAYSYAALVDVNDPRPPFHSAECHLKLEQLTEAESGFYSAKEMSAGKSQYADLHERAGIMLEAVRNKK
E

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssH AAO18054.1 LssH Virulence TTSS locus Protein 9e-36 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEA_003376 YP_003286001.1 type III secretion chaperone protein for YopD (SycD) VFG0202 Protein 4e-39 54
VEA_003376 YP_003286001.1 type III secretion chaperone protein for YopD (SycD) VFG0380 Protein 5e-37 52