Gene Information

Name : VEA_003360 (VEA_003360)
Accession : YP_003285985.1
Strain :
Genome accession: NC_013456
Putative virulence/resistance : Virulence
Product : type III secretion protein SpaR
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 1918749 - 1919474 bp
Length : 726 bp
Strand : -
Note : -

DNA sequence : 
ATGGCATGCTTCATCTTTTTGCCTATTTTGAGCAAGCAAATGCTAGGCGGCACCATGGTGAGGAATGGTGTGCTTTGCTC
ACTCGCGCTGTTTATATTTCCGATGATTAATCAGCAAAGCTTGCCCGCAGAAGCCGACGGCATTTGGCTGATAGTGATTT
TGGGTAAGGAGGTATTAATTGGGCTATTGATAGGGTTTGTTGCTGCTATCCCCTTTTGGGCGATAGAAGCGGCCGGTTTT
CTGGTCGACAACCAACGTGGTGCTGCCATGGCAAGTATGTTTAACCCAACGCTAGGCTCACAATCCACACCAACAGCCGT
GTTGCTGACCCAAACGTTGATTACCCTGTTCTTCTCTGGCGGGGGCTTTGTCACTTTTATCTATGCGTTATTCAAAAGCT
ATACATCTTGGCCGATCGTGGACTTTTTCCCAACCGTTAGCGACGCATGGGTGAGCTTCTTCTACGCGCAATTTGAACAG
CTTATGTGGCTTGGTGTGTTGATGTCTGCCCCATTAGTGTTGGCAATGTTTCTTGCTGAGTTTGGTCTGGCGCTTATCAG
TCGTTTTGCACCGCAATTGAATGTTTTTTTCCTTGCCATGCCAATAAAAAGTGCCATCGCGAGTGTTTTACTGATCGTGT
ATCTCGGGCTAATGATGGATCACTTTGAAGTACAGTTTTACGGCATTACCCGATTCGCAGAACAACTCAATACCATTTGG
CAATAA

Protein sequence : 
MACFIFLPILSKQMLGGTMVRNGVLCSLALFIFPMINQQSLPAEADGIWLIVILGKEVLIGLLIGFVAAIPFWAIEAAGF
LVDNQRGAAMASMFNPTLGSQSTPTAVLLTQTLITLFFSGGGFVTFIYALFKSYTSWPIVDFFPTVSDAWVSFFYAQFEQ
LMWLGVLMSAPLVLAMFLAEFGLALISRFAPQLNVFFLAMPIKSAIASVLLIVYLGLMMDHFEVQFYGITRFAEQLNTIW
Q

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscT AAO18038.1 LscT Virulence TTSS locus Protein 4e-61 64
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 1e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEA_003360 YP_003285985.1 type III secretion protein SpaR VFG0186 Protein 1e-57 64
VEA_003360 YP_003285985.1 type III secretion protein SpaR VFG0396 Protein 6e-69 63