Gene Information

Name : VEA_003359 (VEA_003359)
Accession : YP_003285984.1
Strain :
Genome accession: NC_013456
Putative virulence/resistance : Virulence
Product : type III secretion inner membrane protein HrpY
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4792
EC number : -
Position : 1917678 - 1918733 bp
Length : 1056 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGCAGAAAAAACAGAGCAACCCACCGCAAAAAAGTTACGCGATGCCAGGCAGAAAGGTCAGGTAGCCAAAAGCCA
AGAAATCGTATCGTCTGCATTAATTTTGGCGCTCATAATTGTACTGTTTGCGTTCGCCGATTATTACATGTCGCACATCT
CAGCGCTTATTCTCCTACCAAGTAAGCTTGCTTATCAGGGCTTCCAAGATGCGCTAGTCGATGTCGCTATTGCCATCGCA
AAAGAAATTGCCTATCTACTCGCCCCGATTATTCTGGTTGCTGCACTCGTCGCCATCTTTTCCAATATGGGGCAGTTCGG
CTTCCTATTTAGTGGTGAATCCGTTAAACCCGACATCAAAAAGATCAATCCCGTCGAAGGTGCCAAACGCATTTTTTCGC
TTAAGAGTGTGATTGAGTTTATCAAGTCGATCCTTAAAGTCTCTCTTCTTTCCTGCATTATCTGGTTGACCTTACGCGGT
AACATCAACGCTTTGATGCAAATTCCAACTTGCGGGCTAGAATGTGTCCCGACCATTACTGGCGTCATGATTAAACAATT
AATGATTATCTCTTCGGTAGGTTTCATCGTCATCGCTGCAGCTGATTTTGCGTACCAAAAATTTGACCACACGAAGAAAC
TCAAAATGAGCAAGGACGAAGTGAAGCGCGAATACAAAGAGATGGAAGGCAGCCCAGAAATCAAAAGTAAACGTCGTCAG
CTACACCAAGAGCTACAGGCCTCCAATCAACGTGAAAATGTTAAACGCTCCAATGTGTTGGTAACAAACCCAACGCATAT
TGCGGTTGGTCTGTACTACAAAAAAGGCGAAACGCCCCTACCCGTCATCACCTTGATGGAAACCGATGCGGTAGCCAAAC
GTATGATCGCAATCGCCAAAGAGGAAGGTGTGCCTGTGATGCAAAAAGTCCCTCTTGCTCGCGCACTATACGCGGACGGC
AACGTCGACCAGTACATCCCAAGCGATCTTATTGAGGCAACCGCCGAAGTGCTTCGTTGGCTGGCATCATTGGAGTCGGA
TAAGACGCTGAACTAA

Protein sequence : 
MSAEKTEQPTAKKLRDARQKGQVAKSQEIVSSALILALIIVLFAFADYYMSHISALILLPSKLAYQGFQDALVDVAIAIA
KEIAYLLAPIILVAALVAIFSNMGQFGFLFSGESVKPDIKKINPVEGAKRIFSLKSVIEFIKSILKVSLLSCIIWLTLRG
NINALMQIPTCGLECVPTITGVMIKQLMIISSVGFIVIAAADFAYQKFDHTKKLKMSKDEVKREYKEMEGSPEIKSKRRQ
LHQELQASNQRENVKRSNVLVTNPTHIAVGLYYKKGETPLPVITLMETDAVAKRMIAIAKEEGVPVMQKVPLARALYADG
NVDQYIPSDLIEATAEVLRWLASLESDKTLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscU AAO18037.1 LscU Virulence TTSS locus Protein 1e-93 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEA_003359 YP_003285984.1 type III secretion inner membrane protein HrpY VFG0185 Protein 5e-87 63
VEA_003359 YP_003285984.1 type III secretion inner membrane protein HrpY VFG0397 Protein 8e-87 61
VEA_003359 YP_003285984.1 type III secretion inner membrane protein HrpY VFG0041 Protein 1e-59 45