Gene Information

Name : VEA_003346 (VEA_003346)
Accession : YP_003285971.1
Strain :
Genome accession: NC_013456
Putative virulence/resistance : Virulence
Product : type III secretion cytoplasmic protein YscL
Function : -
COG functional category : N : Cell motility
COG ID : COG1317
EC number : -
Position : 1905309 - 1905947 bp
Length : 639 bp
Strand : +
Note : -

DNA sequence : 
ATGGTTTCATTTGTTGAAATAAAAACAGACAACTTGCAGCTGGCACCTGGCTTAAAGGTGCTGAAAGCGAAAGATTATGC
CAGTTATCTTGATTCGCAACACTTAGTTGAAGCCGCGAACTCCAAAGCTGAAAGCATAATTGCTAATGCCCAACAAGCCT
ACGAAACTGAAAAACAACGTGGTTATCAAGATGGTCTCGCACAAGCCAAGATTGAAAATGCGCAAACGATGGTTGAAACC
CTAGCGCGTTGTAATGATTACTATCAGCAAGTCGAAGAAAAAATGACAGGCGTGGTGTTAGAAGCGGTACGTAAGATCAT
CGATACCTTTGATGATGTCGATACCACGGTGAGCGTCGTGCGAGAAGCGTTGCAATTGGTGAGCAACCAAAAGCAGGTCA
TTTTACATGTCCATCCAGAGCAGGTTGTTGATGTGAGGGAAAAGGTGGCTGGTGTATTGAGTGATTACCCTGAAGTCGGT
TACGTTGACGTGGTAGCAGACGCTCGCTTGAAAAATGGAGGCTGCATTCTGGAAACTGAAGTCGGGATCATCGACGCCAG
TATTGATGGACAGCTGCATGCATTAAAGCAAGCGATGGTGAAGCAACTCAGCGAGCGTAAAATTACGATTCATGAATAA

Protein sequence : 
MVSFVEIKTDNLQLAPGLKVLKAKDYASYLDSQHLVEAANSKAESIIANAQQAYETEKQRGYQDGLAQAKIENAQTMVET
LARCNDYYQQVEEKMTGVVLEAVRKIIDTFDDVDTTVSVVREALQLVSNQKQVILHVHPEQVVDVREKVAGVLSDYPEVG
YVDVVADARLKNGGCILETEVGIIDASIDGQLHALKQAMVKQLSERKITIHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18079.1 LscL Not tested TTSS locus Protein 8e-47 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEA_003346 YP_003285971.1 type III secretion cytoplasmic protein YscL VFG0220 Protein 4e-50 53
VEA_003346 YP_003285971.1 type III secretion cytoplasmic protein YscL VFG0411 Protein 7e-47 52
VEA_003346 YP_003285971.1 type III secretion cytoplasmic protein YscL VFG0049 Protein 2e-29 43