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Name : VEA_003344 (VEA_003344) Accession : YP_003285969.1 Strain : Genome accession: NC_013456 Putative virulence/resistance : Virulence Product : type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ PscJ) Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 1903929 - 1904672 bp Length : 744 bp Strand : + Note : - DNA sequence : ATGATGAATAAAATGAGAGCGGTTTTCATCATGCTCACGTTGTTTCTGGTGGGTTGTCAGACCGAGCTGTACACCAACGT AACTCAGAAAGAGGGGAATGAGATGTTGTCGATCTTATTATCCGAAGGTGTCGTTGCAACAAAAGAACCTGACAAAGACA ACACCGTCAAGTTAATGGTAGACAGTTCTCAAATCGCCTTCGCGGTAGACGCGCTGAAGCGAAAAGGGTATCCAAGAGAG CAGTTTTCTACATTGAAAGAGGTGTTTCCCAAAGACGATTTGATCTCGTCGCCATTAGCAGAACGAGCACGTTTGGTGTA CGCGAAATCTCAAGAACTTTCTTCAACCTTATCTCAGATTGATGGCGTGCTGGTGGCACGTGTTCATGTTGTTTTGGAAG ATCAAGATCTACGTCCAGGAGAGCGTCCAACTCCTGCGTCTGCCTCTGTGTTTATTAAACACGCGGCGGATATTGCGCTT GATTCGTATGTTCCTCAGATTAAATTATTGGTGAACAATAGTATTGAGGGGTTGAATTACGATCGAATCAGCGTAGTGAT GGTACCCTCATCAGAGGTACGAATTGCTACTCAAAACAATCAATTTAAAAGCATTTTGTCGGTTCAGGTCACCAAAGAGA CGGCGAATAATCTTATCGCCATTTTGGTGTTCTTGGTAGCTGCGCTTATCGGTTCAAATATCGCTACTTTTACTTGGTGC CGCAGGAACACAAAGCGTGGTTAA Protein sequence : MMNKMRAVFIMLTLFLVGCQTELYTNVTQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDSSQIAFAVDALKRKGYPRE QFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQDLRPGERPTPASASVFIKHAADIAL DSYVPQIKLLVNNSIEGLNYDRISVVMVPSSEVRIATQNNQFKSILSVQVTKETANNLIAILVFLVAALIGSNIATFTWC RRNTKRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 5e-63 | 60 |
| hrpC | AAB00129.1 | HrpC | Virulence | Hrp PAI | Protein | 2e-27 | 44 |
| hrcJ | NP_791211.1 | type III secretion protein HrcJ | Virulence | Hrp PAI | Protein | 2e-27 | 44 |
| hrcJ | NP_636607.1 | HrcJ protein | Virulence | Hrp PAI | Protein | 6e-34 | 43 |
| XC_3009 | YP_244077.1 | HrcJ protein | Virulence | Hrp PAI | Protein | 6e-34 | 43 |
| hrcJ | AAT96157.1 | HrcJ | Virulence | T-PAI | Protein | 1e-27 | 43 |
| hrcJ | AAT96211.1 | HrcJ | Virulence | T-PAI | Protein | 1e-27 | 43 |
| hrpB3 | AAB08458.1 | HrpB3 | Virulence | Hrp PAI | Protein | 6e-33 | 42 |
| hrcJ | YP_362160.1 | HrcJ protein | Virulence | Hrp PAI | Protein | 8e-33 | 42 |
| hrcJ | AAP34342.1 | HrcJ | Virulence | Hrp PAI | Protein | 6e-33 | 42 |
| hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 5e-29 | 42 |
| hrcJ | AAC35801.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 9e-28 | 42 |
| hrcJ | NP_640764.1 | HrcJ protein | Virulence | Hrp PAI | Protein | 2e-32 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VEA_003344 | YP_003285969.1 | type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ PscJ) | VFG0218 | Protein | 8e-62 | 67 |
| VEA_003344 | YP_003285969.1 | type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ PscJ) | VFG0409 | Protein | 3e-63 | 59 |
| VEA_003344 | YP_003285969.1 | type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ PscJ) | VFG0051 | Protein | 4e-35 | 43 |
