Gene Information

Name : VEA_003343 (VEA_003343)
Accession : YP_003285968.1
Strain :
Genome accession: NC_013456
Putative virulence/resistance : Virulence
Product : type III secretion cytoplasmic protein YscI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1903582 - 1903926 bp
Length : 345 bp
Strand : +
Note : -

DNA sequence : 
ATGATAAACACGCAGTACACCGAGGTGATGCAAACCAACATTGATAAGTTGCAGGATGCACAAGTCGAGGACGGTTTAAG
TGAACGTTTCGAACAAGCCATGTCGGTTCCCGAGGCGAATAATGGCTTGGAGGGCGGTTTGCTCGAAAACATCAGCGAGT
TAAAAAATACTATCGATAACGCGAAAAGTAACCTGCAAGACAACATGAAGATGGTGGGTGATGATCCGGCGCAATTACTG
CAAATGCAGTGGGCACTGACGCGCATTACTTTTCAAGAAGAGCTGATCGCGAAAACCGTGGGTAAAACCACACAAAACGT
AGAAACCTTATTGAAGGCACAATAG

Protein sequence : 
MINTQYTEVMQTNIDKLQDAQVEDGLSERFEQAMSVPEANNGLEGGLLENISELKNTIDNAKSNLQDNMKMVGDDPAQLL
QMQWALTRITFQEELIAKTVGKTTQNVETLLKAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscI AAO18028.1 LscI Virulence TTSS locus Protein 5e-19 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEA_003343 YP_003285968.1 type III secretion cytoplasmic protein YscI VFG0217 Protein 3e-18 44
VEA_003343 YP_003285968.1 type III secretion cytoplasmic protein YscI VFG0408 Protein 7e-17 42