Gene Information

Name : VEA_003340 (VEA_003340)
Accession : YP_003285965.1
Strain :
Genome accession: NC_013456
Putative virulence/resistance : Virulence
Product : type III secretion cytoplasmic protein YscF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1902330 - 1902578 bp
Length : 249 bp
Strand : +
Note : -

DNA sequence : 
ATGTCATTTTACGATGCTAGTAACAGTGTAAACCTTGATGATGTTAAAGCTAAGTTAGAAAAACAAGCGAAAGATGCCAA
CACAGAAGTGACGGCAGCCATCAAGAACCTAGAAACAAACGCCGATGACCCATCTAAGCTGGCTGAACTTCAGCACGCGA
TCAACCAATGGTCTGTTGTTTACAACATCAATGCGACCACCACTCGTGCGATTAAAGATGTGATGCAGTCGATTCTCCAA
AAGGTATAA

Protein sequence : 
MSFYDASNSVNLDDVKAKLEKQAKDANTEVTAAIKNLETNADDPSKLAELQHAINQWSVVYNINATTTRAIKDVMQSILQ
KV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscF AAO18031.1 LscF Virulence TTSS locus Protein 2e-16 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEA_003340 YP_003285965.1 type III secretion cytoplasmic protein YscF VFG0214 Protein 2e-16 53
VEA_003340 YP_003285965.1 type III secretion cytoplasmic protein YscF VFG0405 Protein 5e-16 49