Gene Information

Name : VEA_003334 (VEA_003334)
Accession : YP_003285959.1
Strain :
Genome accession: NC_013456
Putative virulence/resistance : Virulence
Product : type III secretion thermoregulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 1896514 - 1897374 bp
Length : 861 bp
Strand : +
Note : -

DNA sequence : 
ATGGATGTGTCAGGCCAACTAAACACAGAAAAGGTCGGCTCGAGCTCGCGAAAAATTCGTAGTTTTTCCCGCTATGAAAA
ATCTGACGAAGTATTTCACTCAGACCAATCTCACATTGTTGTCGTTCACAATGGTCAGCTTCGAGTTCAAACAGGTGATT
GCACAATCGATGTTGCGGCAGAAAACGGGGTGTTTCTATCCCAAGGGGATTACTTATTCGAGTACTCGCCCTTAGACGGG
GCATACAAAGCGTCGATTATAACCTACGACAACGAACTCGTTAGCCAGCTATTACAAAAGCACAGTGATCTTTTGATGAT
GCTGCCCAAGGTAGATAAAGTTTGTTCTGGCTTGTTTACTTTTGGTTTGAACATACTCGTAGAGCAAGTGCTTTCCAGCA
TGCAGACGCTTGAGCAACAGGCGTATCCAGATGCGATCATGTGCCTAAAATATGAAGAGTTACTCATTCTTTTGCTGCAC
GGCAAAGGAGGAGAATCACTCTATGCGTTGTTGTCACAACAAACTAACCGAACATCGGAACGGTTACGTCGATTTATGGA
ACAACACTATCTCAAAGAGTGGAAGTTGACTGACTATGCGCAAGAGTTTGGTGCTAGCTTAACGACTTTTAAAGAGCTAT
TTAATGAGCACTATGGCATTTCTCCAAGAGCTTGGATCAGTGAGCGCCGATTGTTGCACGCTCATAAACTCCTGTTGACG
AGTAAGATGAGCATCGTGGATGTGGCGATGGAGGCTGGGTTTTCTAGTCAGTCTTACTTTACGCAGAGTTACCGCCGTCG
TTTTGGAACGACGCCAAGCCGTGTACGTTCGGGAGACGATCAAGTAGCTATCGCGAAATGA

Protein sequence : 
MDVSGQLNTEKVGSSSRKIRSFSRYEKSDEVFHSDQSHIVVVHNGQLRVQTGDCTIDVAAENGVFLSQGDYLFEYSPLDG
AYKASIITYDNELVSQLLQKHSDLLMMLPKVDKVCSGLFTFGLNILVEQVLSSMQTLEQQAYPDAIMCLKYEELLILLLH
GKGGESLYALLSQQTNRTSERLRRFMEQHYLKEWKLTDYAQEFGASLTTFKELFNEHYGISPRAWISERRLLHAHKLLLT
SKMSIVDVAMEAGFSSQSYFTQSYRRRFGTTPSRVRSGDDQVAIAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscA AAO18036.1 LscA Virulence TTSS locus Protein 1e-42 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VEA_003334 YP_003285959.1 type III secretion thermoregulatory protein VFG0208 Protein 1e-45 43
VEA_003334 YP_003285959.1 type III secretion thermoregulatory protein VFG0399 Protein 2e-40 43