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Name : VEA_001778 (VEA_001778) Accession : YP_003284406.1 Strain : Genome accession: NC_013456 Putative virulence/resistance : Virulence Product : capsule polysaccharide modification protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3563 EC number : - Position : 165763 - 167739 bp Length : 1977 bp Strand : - Note : - DNA sequence : ATGTGTAATAGGGTAGTAGTACTATCGAGAGGAATAATCCGTATTTCGAATCTGACAAGTTTTTTAGGTTCAAAGCTGGT TTTGCCCATTTTTCGGTGGTTGTATAGCTGCAACGTTGTTGTCGGGTGGGGCTTTAAAGCCACTGCAAAGCGAGCCAGAG ATTATGCTGAAAAGCATGATCTTACTTACGTAGCATTGGAAGATGGTTTTCTGCGTTCTATTGGCTTAGGAGTGGCGGGC GCGCAGCCTCTGAGTTTGGTTGTCGATGATGTCGGCATCTATTATGATGCAAGACAGCCATCGAAACTTGAAATTCTGAT CAAAGAAAGTGAAGGTTTAGGCTCTGACGAGCTTGTGCGCAGTCGCTTATGTATTGACGCAATTCGTCAGTATCGACTCT CGAAATACAATCAAAGCCAGCGTGATGAGAGTTTATTAGAAGAAAAACCCAAGGTGCTGGTCATTGATCAAACTATGGGG GATGCTTCTGTTGAGGGGGCGCAAGCCTCTCAAGATACTTTTGTGGAAATGCTGAAGCATGCTGTCGAGGCAAATCCCGA CGAAACAATTTGGGTGAAAGTTCATCCTGATGTTGTGCATGGAAAGAAGAGAGGTTTTCTTTACCCTCTACCATTTGAGC ATCCGAATATTCGGCTGCATACGGAAAAAGTAAACCCTTGGGATTTTTTAGATAGCGTTGAAAGTGTTTATACCGTTTCC AGTTTGATGGGATTCGAGGCGCTCTTGGCCGGAGCTAGTGTTCATTGTTTTGGTATGCCGTTTTACGCCGGTTGGGGACT AACGCACGATATACAGCAATGTCCTCGCAGAAACATTGACCGTTCGCTAGAACAGTTGTTTTATGCAGCATATATACAAT ATGCACGCTATGTAGATCCTATTCTTGGAGAGCGATGCGAGATTGAGCGCATTATCAGTTATATTGCTGATACTCTAAAA GTTATGGCAAAACCTTCTAGAACAGTTTCCATATCAAACTTGTCGTGGTGGAAACAACGATGGATTGGTGACTACCTGAA AGCCTGGCGGTTTGAGAAGGTGAGTTCCGAAGCGGAAGAAATGCTGCGCTGGGGTCGTGGGTCGTTGGATGAAAACAGCT ATTGTATTGAAGATGGCTTTATCCGATCTGTAGGGTTAGGGGTGCATTTTAATCGTCCGGTATCTCTTGTGTGCGATTCG CGTGGTATCTACTTTGATGTCCGAGAGCCCAGCGATTTAGAGTATATGTTGGAGAACCAAGATTGTACTGCATGGGATTG TGCGCGATCGCGGGCGTTGATCGCTCAACTGCTGACCGCTAACCTGACGAAATACAATGTTGGTAGCGAGTGTGCGCTTT CTTTACCTAAAGGTCGCAAGATCATTTTGGTGCCGGGCCAGGTAGAGTCTGATGCGTCAATCAAGTATGGCTCACCGGAG ACCTATCACAACGAGGCGCTTCTTAAAGCTGTAAGGACGGCCGAGCCTGATGCCTACATTATTTATAAGCCACATCCCGA TGTTTTGGTCGGCCAGCGAGACAACGGTAATTGGCAGGGAGATTTCATTCACGTAGCCGACCATGTTGAACCCCAGGCTT CAATGGCAAGCTTATTAGAAATAGTTGATGAGGTTCATACCATGACGTCCTTAACCGGGTTTGAAGCATTGTTACGAGGC AAGAGCGTCACCTGTTACGGTTTACCGTTTTATGCGGGCTGGGGACTGACTAATGATAAACTGAATTGTGCAAGAAGAAC GCGTTCTCATTCGGTCGAAAGCTTGGCTTATTTTGCCTTGATAGAATACCCGACTTATGTGGATCCTGTTACGCGTCAAA CGATGACAGCAGAACAGGCGGTGACTCGTGTAGCACAAATGAAAGCTGGAAAAGTGCAAGTCAAAGATACCAAGCTACAG TTGTTACTCGCAGTGAAGAAAGCTAAAAATACGCTCAAGCGATTTATCCGATCTTAG Protein sequence : MCNRVVVLSRGIIRISNLTSFLGSKLVLPIFRWLYSCNVVVGWGFKATAKRARDYAEKHDLTYVALEDGFLRSIGLGVAG AQPLSLVVDDVGIYYDARQPSKLEILIKESEGLGSDELVRSRLCIDAIRQYRLSKYNQSQRDESLLEEKPKVLVIDQTMG DASVEGAQASQDTFVEMLKHAVEANPDETIWVKVHPDVVHGKKRGFLYPLPFEHPNIRLHTEKVNPWDFLDSVESVYTVS SLMGFEALLAGASVHCFGMPFYAGWGLTHDIQQCPRRNIDRSLEQLFYAAYIQYARYVDPILGERCEIERIISYIADTLK VMAKPSRTVSISNLSWWKQRWIGDYLKAWRFEKVSSEAEEMLRWGRGSLDENSYCIEDGFIRSVGLGVHFNRPVSLVCDS RGIYFDVREPSDLEYMLENQDCTAWDCARSRALIAQLLTANLTKYNVGSECALSLPKGRKIILVPGQVESDASIKYGSPE TYHNEALLKAVRTAEPDAYIIYKPHPDVLVGQRDNGNWQGDFIHVADHVEPQASMASLLEIVDEVHTMTSLTGFEALLRG KSVTCYGLPFYAGWGLTNDKLNCARRTRSHSVESLAYFALIEYPTYVDPVTRQTMTAEQAVTRVAQMKAGKVQVKDTKLQ LLLAVKKAKNTLKRFIRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 1e-113 | 43 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 4e-97 | 42 |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 5e-97 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VEA_001778 | YP_003284406.1 | capsule polysaccharide modification protein | VFG0259 | Protein | 4e-114 | 43 |
| VEA_001778 | YP_003284406.1 | capsule polysaccharide modification protein | VFG0692 | Protein | 3e-109 | 42 |
| VEA_001778 | YP_003284406.1 | capsule polysaccharide modification protein | VFG0704 | Protein | 2e-89 | 42 |
