Gene Information

Name : clpA (BLBBGE_589)
Accession : YP_003284199.1
Strain : Blattabacterium sp. Bge
Genome accession: NC_013454
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease, ATP-binding subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : 3.4.21.92
Position : 587716 - 589830 bp
Length : 2115 bp
Strand : -
Note : -

DNA sequence :
ATGATTTATCATTACTCGTCAAACAGTATAAAAAAAATTTTTTTCTCTTCTGCTTATTCAGATGAAGATATAGAAAATGA
TAGTTCTACTTCTTCTTACGGTTCTGGAGGAAGTGGAAGGAGTTCAGGTTATTATGGAGGAACTTCAATCAGAAGTAAAA
CTCCTGTTTTGGACAACTTTGGAAGAGATTTGAATGCTATAGCAATGGAAGGGAAGTTAGATCCTGTAGTCGGTAGAGAT
AAAGAAGTAGAACGCGTTTCTCAAATATTGAGTAGAAGAAAAAAAAATAATCCTTTACTTATAGGAGAACCTGGAGTAGG
AAAATCAGCTATAGCTGAAGGATTAGCTCTTCGTATTGTACAAAAAAAAGTTTCTAGAGTATTATACAACAAAAGAGTAG
TTGTCCTAGATTTAGCCAGTTTAGTTGCTGGAACTAAATATAGAGGACAATTTGAAGAAAGAATGAAGGCTATTATAAAT
GAATCAGAAAAAAATGCGGGATTGATTCTTTTTATAGATGAAATTCACACAATGATTGGAGCGGGAGGGACCACGGGGTC
ATTAGATGCGTCTAACATATTTAAACCGGCTTTAGCTAGAGGAGATATTCAATGTATTGGAGCTACCACGTTAAACGAGT
ATAGACAATATATAGAAAAAGATGGAGCTTTAGAACGAAGATTTCAAAAAATTATAGTCCAACCTTCTTCTGAAGAAGAA
ACTGTAGAAATTTTAAAAAAAATAAAAGGAAAATATGAAAGTCATCATAATGTTCTTTATACAAAAGAGGCTATAAAAGC
TTGTGTAAACCTCACTGTACGATATATTGTAGATCGTCATTTACCAGATAAAGCAATTGATGCTTTAGATGAAGCAGGAT
CTCGCGTACATATCAAAAATATAAAAGTTCCTCAGGAAATAGTTCTTTTAGAAAAGGAATTAGAAAGTATTCGTGAAGAG
AAATCAAAAGTAGTTAAAAGTCAAAAATATGAGGAAGCAGCTAGGCTTCGTGATACAGAAAAACGTATAGAAAAACAATT
AATCAAAGCTCAAAAAGAGTGGGAAGAATCTTCTAAAGAAAATAAAGAAATAGTTTCTGAAGAAAATGTTGAAGAAGTGG
TCTCTATGATGAGTGGGGTTCCAGTCAAAAGAATCGCTCAAGCTGAAATGAAGAAGTTAAATAAAATGATAGATATACTA
AAAGAAAAAATAATAGGACAAGATGAAGCAGTAGAAAAAATAGTCAAAGCAGTACAAAGAAACAGAACTGGATTAAAAGA
TCCTAATTCTCCTATAGGATCTTTTATTTTTTTAGGACAAACAGGAGTTGGAAAAACTTATTTAGCAAAAATTTTTGCAA
AAGAACTATTTGATTCAGAAGAATCACTGATCCGTATAGATATGAGTGAATATATGGAAAAATTCTCTGTTTCTAGATTA
ATAGGAGCTCCTCCAGGTTATGTTGGTTATGAAGAGGGAGGACAATTAACAGAAATTATACGTCGTAAACCTTATTCTGT
TATATTGTTGGATGAAATAGAAAAAGCACATCATGAAGTTTTTAATATTTTATTGCAAATGTTAGATTACGGATGTGTAA
CAGATAGTATTGGAAGAAAAATAAATTTTAAAAATACCGTAATTATTTTTACGTCAAATACAGGAACACAACAATTAAAA
GAATTTGGTCAAGGAATAGGATTTCATACTCAAGCCAGACAATCAAATAATTATATTAAAAATGTGCTAGAACAAGCTTT
AAAGAAAACTTTTTCTCCAGAATTTTTAAATAGAATAGATGATATTATTGTTTTTAATTCTTTAACTCAAAAAGATATAT
CTAAAATTACTCATATAGAACTAGAAAAAATAATACTTCACGTATCTAATTTAGGATATAAAATAACTTTATTTCCTGAA
GTCAAAGATTTTATTCAAAAAAAAGGATTTGATCATGAATATGGAGCTCGTCCTTTAAAAAGAGTAATAGAAAAATTTAT
AAAAAATCCTATATCAGAATGTATAATCAGTGAAAAATTAAAAAAAGGAGATCAAATTTTATTAAAAATGAATGAAAAAA
ATAATAATATAGAAGTTTCTATTCAGAATATATGA

Protein sequence :
MIYHYSSNSIKKIFFSSAYSDEDIENDSSTSSYGSGGSGRSSGYYGGTSIRSKTPVLDNFGRDLNAIAMEGKLDPVVGRD
KEVERVSQILSRRKKNNPLLIGEPGVGKSAIAEGLALRIVQKKVSRVLYNKRVVVLDLASLVAGTKYRGQFEERMKAIIN
ESEKNAGLILFIDEIHTMIGAGGTTGSLDASNIFKPALARGDIQCIGATTLNEYRQYIEKDGALERRFQKIIVQPSSEEE
TVEILKKIKGKYESHHNVLYTKEAIKACVNLTVRYIVDRHLPDKAIDALDEAGSRVHIKNIKVPQEIVLLEKELESIREE
KSKVVKSQKYEEAARLRDTEKRIEKQLIKAQKEWEESSKENKEIVSEENVEEVVSMMSGVPVKRIAQAEMKKLNKMIDIL
KEKIIGQDEAVEKIVKAVQRNRTGLKDPNSPIGSFIFLGQTGVGKTYLAKIFAKELFDSEESLIRIDMSEYMEKFSVSRL
IGAPPGYVGYEEGGQLTEIIRRKPYSVILLDEIEKAHHEVFNILLQMLDYGCVTDSIGRKINFKNTVIIFTSNTGTQQLK
EFGQGIGFHTQARQSNNYIKNVLEQALKKTFSPEFLNRIDDIIVFNSLTQKDISKITHIELEKIILHVSNLGYKITLFPE
VKDFIQKKGFDHEYGARPLKRVIEKFIKNPISECIISEKLKKGDQILLKMNEKNNNIEVSIQNI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 5e-152 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpA YP_003284199.1 ATP-dependent Clp protease, ATP-binding subunit VFG0079 Protein 1e-165 54
clpA YP_003284199.1 ATP-dependent Clp protease, ATP-binding subunit VFG0080 Protein 2e-138 48