Gene Information

Name : SAAV_0869 (SAAV_0869)
Accession : YP_003281792.1
Strain : Staphylococcus aureus ED98
Genome accession: NC_013450
Putative virulence/resistance : Unknown
Product : phage minor structural protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3064
EC number : -
Position : 887732 - 891514 bp
Length : 3783 bp
Strand : +
Note : -

DNA sequence :
GTGATACATGTTTTAGATTTTAACGACAAGATTATAGATTTCCTTTCTACTGATGACCCTTCCTTAGTTAGAGCGATTCA
TAAACGTAATGTTAATGACAATTCAGAAATGCTTGAACTGCTCATATCATCAGAAAGAGCTGAAAAGTTCCGTGAACGAC
ATCGTGTTATTATAAGGGATTCAAACAAACAATGGCGTGAATTTATTATTAACTGGGTTCAAGATACGATGGACGGCTAC
ACAGAGATAGAATGTATAGCGTCTTATCTTGCTGATATAACAACAGCTAAACCGTATGCACCAGGCAAATTTGAGAAAAA
GATAACTTCAGAAGCATTGAAAGATGTGTTGAGTGATACAGGTTGGGAAGTTTCTGAACAAACCGAATACGATGGCTTAC
GTACTACGTCATGGACTTCTTATCAAACTAGATATGAAGTTTTAAAGCAATTATGTACAACCTATAAAATGGTATTGGAT
TTTTATATAGAGCTTAGTTCTAATACCGTCAAAGGTAGATATGTGGTACTCAAAAAGAAAAACAGCTTATTCAAAGGTAA
AGAAATTGAGTATGGTAAAGATTTGGTTGGGTTAACTAGGAAGATTGATATGTCAGAAATCAAAACAGCATTAATTGCTG
TGGGACCCGAAAACGACAAAGGAAAGCGTTTAGAGTTAGTTGTGACAGATGACGAAGCACAAAGTCAATTCAACTTACCT
ACCCGTTATATTTGGGGAATATACGAACCTCAATCAGATGATCAAAATATGAATGAAACACGGTTGCGTTCTTTAGCCAA
AACAGAGTTAAATAAACGTAAGTCGGCAGTTATGTCATATGAGATTACTTCTACTGATTTGGAAGTTACGTATCCGCACG
AGATTATATCAATTGGTGATACAGTCAGAGTAAAACATAGAGATTTTAACCCGCCATTGTATGTAGAGGCAGAAGTTATT
GCCGAAGAATATAACATAATTTCAGAAAATAGCACATATACATTCGGTCAACCTAAAGAGTTCAAAGAATCAGAATTACG
AGAAGAGTTTAACAAGCGATTGAACATAATACATCAAAAGTTAAACGATAATATTAGCAATATCAACACTATAGTAAAAG
ATGTTGTAGATAGTGAATTAGAATACTTTGAACGCAAAATACACAAAAGTGATACACCGCCAGAAAATCCAGTCAATGAT
ATGCTTTGGTATGATACAAGTAACCCTGATGTTGCTGTCTTGCGTAGATATTGGAATGGTCGATGGATTGAAGAAACACC
AAATGATGTTGAAAAATTAGGTGGTATAACAAGAGAGAAAGCGCTATTCAGTGAATTAAACAATATATTTATTAATTTAT
CTATACAACACGCTAGTCTTTTGTCAGAAGCTACAGAATTACTGAATAGCGAGTACTTAGTAGATAATGATTTGAAAGCG
GACTTACAAGCAAGTTTAGACGCTGTGATTGATGTTTATAATCAAATTAAAAATAATTTAGAATCTATGACACCCGAAAC
TGCAACGATTGGTCGGTTGGTAGATACAAAAACTTTATTTCTTGAGTATAGAAAGAAATTACAAGATGTTTATACAGATG
TAGAAGATGTCAAAATCGCCATTTCAGATAGATTTAAATTATTACAGTCACAATACACTGATGAAAAATATAAAGAAGCG
TTGGAAATAATAGCAACAAAATTTGGTTTAACGGTGAATGAAGATTTGCAGTTAGTCGGAGAACCTAATGTTGTTAAATC
AGCTATTGAAGCAGCTAGAGAATCCACAAAAGAACAATTACGTGACTATGTAAAAACATCGGACTATAAAACAGACAAAG
ACGGTATTGTTGAACGTTTAGATACTGCTGAAGCTGAGAGAACGACTTTAAAAGGTGAAATCAAAGATAAAGTTACGTTA
AACGAATATCGAAACGGATTGGAAGAACAAAAACAATATACTGATGACCAGTTAAGTGATTTGTCCAATAATCCTGAGAT
TAAAGCAAGTATTGAACAAGCAAATCAAGAAGCGCAAGAAGCTTTAAAATCATACATTGATGCTCAAGATGATCTTAAAG
AGAAGGAATCGCAAGCGTATGCTGATGGTAAAATTTCGGAAGAAGAGCAACGCGCTATACAAGATGCTCAAGCTAAACTT
GAAGAGGCAAAACAAAACGCAGAACTAAAGGCTAGAAACGCTGAAAAGAAAGCTAATGCTTATACAGACAACAAGGTCAA
AGAAAGCACAGATGCACAGAGGAAAACATTGACTCGCTATGGTTCTCAAATTATACAAAATGGTAAGGAAATCAAATTAA
GAACTACAAAAGAAGAGTTTAATGCTTCTAAAAGAACACTATCAAGAGTGTTAGCAGACATCACTGTAAATGCTATGAAA
GGCATCTATTTAAGGTATGACGAAAATGGGGCGATTACTTCACATACTATTGATAAAGATGGCGTGAAAATTAGTGGCGA
TAAAGTTGATATAACAGCGAATAGAGAATTTAATGTAGTCGCAAATAATATTAATAACAAAGTTGGTAAAAATGACATTG
TTAATAGCCTAAACTTATCAAATGAAGGTCTTGACATCAATGTGAATAGAATTGGTATTAAAGGCGGAAATGCTAACCGT
TATGTACAAGTTCAAAATGATTTTATTGAACTTGGCGGAATCGTACAACGAACTTGGAAAGGCAAACGATCAACCGATGA
TATATTCACACGTCTTAAAGATGGACATCTAAGGTTTAGAAATAATACCGCAGGCGGTTCACTTTATATGTCACATTTTG
GTATTTCAACATATATTGATGGAGAAGGCGAAGACGGAGGTTCATCCGGTACTATTCAATGGTGGGATAAAACTTACAGT
GATAGCGGTATGAATGGCATAACAATCAATTCTTATGGCGGTGTAGTCGCTTTAACATCTGACTACAACCGAATTATTAT
CGATTCATATGCTTCAGCTAATATTGAAAGTAGAGAAGCACCGATATATTTATCTCCGAACACCAAAAATAAACCTGGTT
TAAACCGATTCGCATTCACATTATCAAACGCTGATAGTGCATACGAAACTGACGGTTATATCATGTTTGGTTCAGATGAA
AACTATAAGTACGGTGCTGGATTAAGATTTTCTAAACGTAGCAATAAAGGATTGGTTCAAGTCGTTAATGGTGACTATGC
TACAGGCGGAGACACTACAATTGAGTCAGGTATGGGCAAATTCAACATAGTTAAACGAAGAGATGGAAATAGTTACGTTA
GCATTCAAAGTTATGATTTATTGGCGGTAGGTTCTGATAATGCTGGCGATAGAGTCGCTTCTAATTCTATTTATAAGCGT
ACTTATTCAGCACCTGCTAACTTACACATTACTTCTGCTGGAACAATTGGGCGTGCTACTTCTGCCAAAAAGTATAAAAT
TTCAATCGAAAATCAATACATCAATGAAGACGATCAGTTCAGTCATTCAAAAGAGATTTTAAAGCTTCCAATTCGTACAT
GGTTTGACAAATATGAATCGGAAATAATGGCTAAAGAATTGGAAAGTGGTAAAAAGTTATCTGATGATACTTTTAAACTT
AGTCGACATACTGGCTTAATAGCGGAAGAGGTTGAAGAATTAGGATTTAATGAATTTGTTATTTATGATGACAACGGAGA
AATCGAAGGTATCGCATACGATAGACTTTGGGTTCATTTAATACCTATTATTAAAAACCAGCAATCAAAAATCGAAAAAC
TGGAGGAATTAATAAATGAATGA

Protein sequence :
MIHVLDFNDKIIDFLSTDDPSLVRAIHKRNVNDNSEMLELLISSERAEKFRERHRVIIRDSNKQWREFIINWVQDTMDGY
TEIECIASYLADITTAKPYAPGKFEKKITSEALKDVLSDTGWEVSEQTEYDGLRTTSWTSYQTRYEVLKQLCTTYKMVLD
FYIELSSNTVKGRYVVLKKKNSLFKGKEIEYGKDLVGLTRKIDMSEIKTALIAVGPENDKGKRLELVVTDDEAQSQFNLP
TRYIWGIYEPQSDDQNMNETRLRSLAKTELNKRKSAVMSYEITSTDLEVTYPHEIISIGDTVRVKHRDFNPPLYVEAEVI
AEEYNIISENSTYTFGQPKEFKESELREEFNKRLNIIHQKLNDNISNINTIVKDVVDSELEYFERKIHKSDTPPENPVND
MLWYDTSNPDVAVLRRYWNGRWIEETPNDVEKLGGITREKALFSELNNIFINLSIQHASLLSEATELLNSEYLVDNDLKA
DLQASLDAVIDVYNQIKNNLESMTPETATIGRLVDTKTLFLEYRKKLQDVYTDVEDVKIAISDRFKLLQSQYTDEKYKEA
LEIIATKFGLTVNEDLQLVGEPNVVKSAIEAARESTKEQLRDYVKTSDYKTDKDGIVERLDTAEAERTTLKGEIKDKVTL
NEYRNGLEEQKQYTDDQLSDLSNNPEIKASIEQANQEAQEALKSYIDAQDDLKEKESQAYADGKISEEEQRAIQDAQAKL
EEAKQNAELKARNAEKKANAYTDNKVKESTDAQRKTLTRYGSQIIQNGKEIKLRTTKEEFNASKRTLSRVLADITVNAMK
GIYLRYDENGAITSHTIDKDGVKISGDKVDITANREFNVVANNINNKVGKNDIVNSLNLSNEGLDINVNRIGIKGGNANR
YVQVQNDFIELGGIVQRTWKGKRSTDDIFTRLKDGHLRFRNNTAGGSLYMSHFGISTYIDGEGEDGGSSGTIQWWDKTYS
DSGMNGITINSYGGVVALTSDYNRIIIDSYASANIESREAPIYLSPNTKNKPGLNRFAFTLSNADSAYETDGYIMFGSDE
NYKYGAGLRFSKRSNKGLVQVVNGDYATGGDTTIESGMGKFNIVKRRDGNSYVSIQSYDLLAVGSDNAGDRVASNSIYKR
TYSAPANLHITSAGTIGRATSAKKYKISIENQYINEDDQFSHSKEILKLPIRTWFDKYESEIMAKELESGKKLSDDTFKL
SRHTGLIAEEVEELGFNEFVIYDDNGEIEGIAYDRLWVHLIPIIKNQQSKIEKLEELINE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SA1764 NP_375062.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 99
SAV1953 NP_372477.1 phi PVL ORF 20 and 21-like protein Not tested ¥ÕSa3 Protein 0.0 96
MW1893 NP_646710.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 96
SAOV_1916c YP_005737361.1 Structural protein, phage associated Not tested ¥ÕSa3 Protein 0.0 90
SAKOR_01930 YP_008492118.1 hypothetical protein Not tested ¥ÕSa3 Protein 0.0 90
SAUSA300_1928 YP_494579.1 phi77 ORF002-like protein, phage minor structural protein Not tested ¥ÕSa3 Protein 0.0 90
SAUSA300_1928 YP_494579.1 phi77 ORF002-like protein, phage minor structural protein Not tested ¥ÕSa3 Protein 0.0 90
SAOV_1117 YP_005736612.1 Structural protein, phage associated Not tested ¥ÕSa2 Protein 0.0 90