Gene Information

Name : CtCNB1_0845 (CtCNB1_0845)
Accession : YP_003276887.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Resistance
Product : Lipoprotein releasing systemATP-binding protein lolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 949279 - 949953 bp
Length : 675 bp
Strand : +
Note : COG1136, SalX, ABC-type antimicrobial peptide transport system

DNA sequence : 
ATGGGCCAGAGCGTGCTGGAGGCACGCGGCCTGACCAAGCGCTTTGCCGAAGGCAAGCTGGATGTGACCGTGCTGCAGGG
AGTGGATCTGCAGGTTCAGGCGGGCGAGACACTGGCGATTGTCGGCGCCTCGGGTTCGGGCAAGTCCACCTTGCTGCACT
TGCTGGGCGGGCTGGATGCACCCTCCACCGGCAGCGTCAGCCTCATGGGCCAGCCCTTGCACCAGCTCAGCCCGCAAAAG
CAGGGTGCGCTGCGCAACCAGCATCTGGGCTTTATCTACCAGTTCCATCATCTGCTGGCCGAGTTCTCGGCACAGGAGAA
TGTGGCCATGCCGCTGCGCATTCGCCGCGATGCCAAGGAGGACTGCATGGATCGCGCGGCCGAGATGCTGCGCGCCGTGG
GCCTGGGCCAGCGCATGGCGCATCGCCCGGCCGAGCTGTCGGGCGGCGAGCGTCAGCGCGTGGCCATTGCACGTGCCCTG
GTCACGCGTCCGGCCTGCGTGCTGGCCGACGAGCCCACGGGCAATCTGGATCGCGGCACGGCCGATACGGTGTTTGCGCT
GATGCTGGAGCTGGCGCGCAGCCATGGCACGGCGTTTGTGATGGTCACTCATGACGAAGGTCTGGCCGCGCGTTGCGATC
GCATGGTCAGGCTGGGGCAGGGACAGCTGGCCTGA

Protein sequence : 
MGQSVLEARGLTKRFAEGKLDVTVLQGVDLQVQAGETLAIVGASGSGKSTLLHLLGGLDAPSTGSVSLMGQPLHQLSPQK
QGALRNQHLGFIYQFHHLLAEFSAQENVAMPLRIRRDAKEDCMDRAAEMLRAVGLGQRMAHRPAELSGGERQRVAIARAL
VTRPACVLADEPTGNLDRGTADTVFALMLELARSHGTAFVMVTHDEGLAARCDRMVRLGQGQLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-32 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-32 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-32 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_0845 YP_003276887.1 Lipoprotein releasing systemATP-binding protein lolD NC_008702.1.4606598. Protein 6e-33 45