Gene Information

Name : CtCNB1_0534 (CtCNB1_0534)
Accession : YP_003276576.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 596378 - 597085 bp
Length : 708 bp
Strand : +
Note : COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGACAAGCGCCGCACCCCGCATTTTGCTGATTGAAGACGACGCCAGCATCCGCCGCTTTGTGCGCCTGGCACTGGAGGA
CGAAGGTTGGCAGGTGTTCGAGTCAGAAACCGCCAGGCGCGGCCTGATCGAGGCCGCCAGCCGCCAGCCCGACGCCGTGG
TGCTGGACCTGGGCCTGCCCGATGCCGATGGCAAGACCGTGATTGCCGAGCTGCGCGCCTGGAGCCAGCTGCCGATTCTG
ATCCTGTCCGCGCGCGAGCGGGAAGAGGACAAGGTGGCGGCGCTGGACGCCGGGGCCGACGACTATCTGACCAAGCCCTT
CGGCGTGCCCGAGCTGCTGGCCAGGCTGCGCGTGATGCTGCGCCGCCGCCAGCAGGCATCGGCGGCAGACAAGCCCGGCA
GCTGTGCGCGTTTCGGCGCGGTGGTGGTGGATCTGGCGGCGCACGATGTCAGGCGCGACGGTGTGGCCGTGCACCTGACG
CCCATAGAGTTCCGCCTGCTGGCGGCCCTGATTGCCGGCCATGGCAAGGTGCTGACGCATCGCCAGTTGCTGCTGCAGGT
CTGGGGCGCTGAATATCTGGACCGCCCCCACTATCTGCGCGTGCACATGGCCAACCTGCGCCAGAAGATAGAGCTCGATC
CGGCCCAGCCCCGGCATCTGGTAACCGAGTTGCAAGTCGGTTATCGCTTGGTGGGCCTGGAAGGCTGA

Protein sequence : 
MTSAAPRILLIEDDASIRRFVRLALEDEGWQVFESETARRGLIEAASRQPDAVVLDLGLPDADGKTVIAELRAWSQLPIL
ILSAREREEDKVAALDAGADDYLTKPFGVPELLARLRVMLRRRQQASAADKPGSCARFGAVVVDLAAHDVRRDGVAVHLT
PIEFRLLAALIAGHGKVLTHRQLLLQVWGAEYLDRPHYLRVHMANLRQKIELDPAQPRHLVTELQVGYRLVGLEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 2e-32 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_0534 YP_003276576.1 two component transcriptional regulator BAC0487 Protein 2e-16 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_0534 YP_003276576.1 two component transcriptional regulator VFG1390 Protein 1e-25 41