Gene Information

Name : CtCNB1_0516 (CtCNB1_0516)
Accession : YP_003276558.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter superfamily protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 567435 - 569168 bp
Length : 1734 bp
Strand : -
Note : COG4147, DhlC, Predicted symporter

DNA sequence :
ATGAAGCAGCGCATCTCTTCCCAATGGCTGGCGGGCGCTGCGGCGCTGGTCGCGACAGCTCCCGTGCTGGCCGCCGGCGG
CGACGTCGGCAACGCCGCCAAGCAGGCCACCAACTGGACGGCCATCATCATGTTCACCGCCTTTGTGGTGGCAACCCTGT
GGATCACCAAATGGGCGGCGGGCCGCACCAAGTCGGCGTCCGATTTCTATACCGCAGGCGGCGGCATCACCGGCTTTCAG
AACGGTCTGGCGATTGCGGGCGACTATATGTCCGCCGCCTCCTTCCTGGGCATCTCGGCCTCCGTCATGGCCAGCGGCTA
TGACGGCCTGATCTACTCCATCGGCTTTCTGGTCGGCTGGCCGATTCTGACTTTTCTGCTGGCGGAACGCCTGCGCAATC
TGGGCCGCTTCACTTTTGCCGACGTGGCCGGCTACCGTTTCGAGCAAAAGCCCTTCCGGATTTTTGCCTCCTGCGGCACG
CTGGTCGTGGTGGCCTTCTATCTGATTGCCCAGATGGTGGGCGCAGGCCAGCTGATCAAGCTGCTGTTCGGTCTGGACTA
CTGGATTGCCGTGGTGCTGGTCGGCGGCCTGATGATGATCTATGTGCTGTTCGGCGGCATGACGGCCACCACCTGGGTGC
AGATCATCAAGGCCTGCCTGCTGCTGGCCGGCGTGACCTTCATGGGCTTCATGGTGCTGGCCAAGTACGGCTTCAGCCCC
GAGGCACTGTTTGCCGAAGGTGTGAAGGTTCGCACCCAGATCGCCGCAAATGGCGGCGCAGAGCCATCCGTGGCAGAAAA
GCTCGGTCTGGCCATCATGGGTCCGGGCGGCTTCATCAAGGACCCGATCTCCGCCATCAGCTTCGGCATGGCGCTGATGT
TCGGCACCCTGGGCCTGCCCCACATCCTGATGCGCTTCTTCACCGTGCCTGACGCCAAGGAAGCACGCAAGAGCGTGTTC
TGGGCCACGACCTGGATCGGCTACTTCTATGTGCTGATCTTCATCATCGGCTTCGGCGCCATCACCCTGGTGCTCACCAA
CCCCGAAATGGCGGACACGGCCAAGGGCGTGATCCACGGCGGCGCAGGCACGGCCAATATGGCGGCCGTGCTGGTGGCCA
AGACCGTGGGCGGCGATGTGTTCTACGGCTTCATCTCGGCCGTGGCCTTTGCCACGATTCTCGCCGTGGTCGCAGGTCTG
ACCCTGTCCGGCGCCTCGGCCGTCTCGCACGACCTCTACGCCACCGTCATCAAGAAGGGCAAGGCCGACAGCGCCTCCGA
ACTCAAGGTCTCGCGCATCACCACGCTGTGCCTGGGCTTTGTGGCCGTGCTGCTGGGCATTGTGTTCGAGAAGCAGAACA
TCGCCTTCATGGTCTCGCTGGCCTTTGCCGTGGCGGCTTCGGCCAACTTCCCGCCGCTGCTGCTGTCGGTGCTGTGGAAA
GACTGCACCACCAAGGGCGCCGTCATCGGCGGCTTCATGGGCCTAGTCTCCTCCGTGGGCCTGACCATTGTGTCGCCCTC
GGTATGGGAAGGCACTTTGGGCAACCCGGCCGGCTCGGCATGGTTCCCCTACGCCTCGCCTGCACTGTTCTCCATGGCGA
TCGGCTTCTTCGGCGTGTGGCTGTTCTCCGTGCTCGACAAGAGCGCTCAGGCTGCCAAGGAGCGCGCCGTGTTCCCTGCG
CAGCAAGTGCGCTCGGAAACCGGTCTGGGTGCCGCTGGCGCATCGGGCCACTAA

Protein sequence :
MKQRISSQWLAGAAALVATAPVLAAGGDVGNAAKQATNWTAIIMFTAFVVATLWITKWAAGRTKSASDFYTAGGGITGFQ
NGLAIAGDYMSAASFLGISASVMASGYDGLIYSIGFLVGWPILTFLLAERLRNLGRFTFADVAGYRFEQKPFRIFASCGT
LVVVAFYLIAQMVGAGQLIKLLFGLDYWIAVVLVGGLMMIYVLFGGMTATTWVQIIKACLLLAGVTFMGFMVLAKYGFSP
EALFAEGVKVRTQIAANGGAEPSVAEKLGLAIMGPGGFIKDPISAISFGMALMFGTLGLPHILMRFFTVPDAKEARKSVF
WATTWIGYFYVLIFIIGFGAITLVLTNPEMADTAKGVIHGGAGTANMAAVLVAKTVGGDVFYGFISAVAFATILAVVAGL
TLSGASAVSHDLYATVIKKGKADSASELKVSRITTLCLGFVAVLLGIVFEKQNIAFMVSLAFAVAASANFPPLLLSVLWK
DCTTKGAVIGGFMGLVSSVGLTIVSPSVWEGTLGNPAGSAWFPYASPALFSMAIGFFGVWLFSVLDKSAQAAKERAVFPA
QQVRSETGLGAAGASGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 2e-123 53
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 3e-85 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_0516 YP_003276558.1 SSS sodium solute transporter superfamily protein BAC0564 Protein 2e-157 64
CtCNB1_0516 YP_003276558.1 SSS sodium solute transporter superfamily protein BAC0570 Protein 6e-139 61