Gene Information

Name : CtCNB1_4783 (CtCNB1_4783)
Accession : YP_003280825.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5347976 - 5348653 bp
Length : 678 bp
Strand : +
Note : COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGCATACTGATTGCCGAAGACGACCAGGTGCTGGCGGATGGCCTGCTGCGCACGCTGCGCAGCTCGGGCGCCGTCGT
CAGCCATGTGGCCAACGGCAGCGAGGCCGATACGGCCTTGCTGACCAGCAGCGAATTCGATTTGCTGATTCTCGATCTGG
GCCTGCCAAAGGTGCACGGCCTGGAAGTGCTCAAGCGCCTGCGCGGGCGCGGCGATGCGCTGCCCGTGCTGATTCTCACG
GCCGCCGATTCGATCGAAGAGCGCGTACAGGGCCTGGACTATGGTGCCGACGACTACATGGCCAAGCCGTTTGCGCTGTC
CGAGCTGGAAGCGCGCGTGCGCGCCCTCACGCGTCGCGGCATGGGCGGCGCCAGCTCCACCATCAAGCATGGCCCGCTGG
TCTATGACCAGACCGGCCGGGTCGCCACCATAGACGGCAAGATGGTGGAGCTGTCGGCGCGCGAGCTGGGCCTGCTGGAG
GTGCTGCTGCAGCGCGCGGGCCGCCTGGTCAGCAAGGACCAGCTGGTGGAGCGCCTGTGCGAATGGGGCGAAGAGGTGAG
CAACAACGCCATCGAGGTCTATATCCACCGCCTGCGCAAGAAAATCGAGAAAGGCCCGATCCGCATCGCCACCGTGCGTG
GCCTCGGTTACTGCCTGGAAAAGATAGCCCCCCCCTGA

Protein sequence : 
MRILIAEDDQVLADGLLRTLRSSGAVVSHVANGSEADTALLTSSEFDLLILDLGLPKVHGLEVLKRLRGRGDALPVLILT
AADSIEERVQGLDYGADDYMAKPFALSELEARVRALTRRGMGGASSTIKHGPLVYDQTGRVATIDGKMVELSARELGLLE
VLLQRAGRLVSKDQLVERLCEWGEEVSNNAIEVYIHRLRKKIEKGPIRIATVRGLGYCLEKIAPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-37 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_4783 YP_003280825.1 two component transcriptional regulator BAC0487 Protein 7e-37 46
CtCNB1_4783 YP_003280825.1 two component transcriptional regulator BAC0083 Protein 4e-34 44
CtCNB1_4783 YP_003280825.1 two component transcriptional regulator NC_002516.2.879194.p Protein 7e-33 43
CtCNB1_4783 YP_003280825.1 two component transcriptional regulator BAC0638 Protein 6e-27 43
CtCNB1_4783 YP_003280825.1 two component transcriptional regulator BAC0347 Protein 2e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_4783 YP_003280825.1 two component transcriptional regulator VFG0473 Protein 6e-38 44
CtCNB1_4783 YP_003280825.1 two component transcriptional regulator VFG1390 Protein 3e-33 42