Gene Information

Name : CtCNB1_4745 (CtCNB1_4745)
Accession : YP_003280787.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator LuxR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 5302894 - 5303523 bp
Length : 630 bp
Strand : -
Note : COG4566, TtrR, Response regulator

DNA sequence : 
ATGGAACCTGTAACCGACGCTACCGTCTACGTGGTGGACGACGATGCCGATGTCCGAGAGGCATTGGCATGGCTGCTGCG
TTCGCGCAGATTGCTGAGCGAGTGCTATCGCAACGCCGAAGAATTCGAGCAGGCCGTGCTGCAGACCAGCCCCGTGACGC
GTCGCCCCTGCTGCCTGCTGCTCGATATGCGCATGACGGGCATGAGCGGGCTGTCGCTGTTCAACCGCATGCTGGAGCGC
GGCCAGATCGAGGCCATGCCCGTGATCTTTCTCACCGGCCATGCCGATGTGCCGACAGCCGTGGATACGGTCAAACGTGG
TGCCTTCGATTTCTGCGAGAAGCCGTTTTCCGACAACGCGCTGGTGGACCGGGTGGAGCAGGCGCTGGCGCTGTCCGCCG
AGCATCTGGCCGCCTTGCAAGCACGTGAAGAGGTGCGCAGCCGCTTGGACGAGCTCACCGATCGCGAGAAAGACGTGATG
AAGCTGGTTGTCGAGGGCGTGCCGAACAAGTTGATTGCCGATCAGCTCGACATCAGCGTGCGCACCGTGGAGGTGCACCG
GGCGCGTGTCTTCGACAAGATGCAGGTCAAGTCGGCCGTCGAGCTGGCCAATCTGCTGCGCAACGCCTGA

Protein sequence : 
MEPVTDATVYVVDDDADVREALAWLLRSRRLLSECYRNAEEFEQAVLQTSPVTRRPCCLLLDMRMTGMSGLSLFNRMLER
GQIEAMPVIFLTGHADVPTAVDTVKRGAFDFCEKPFSDNALVDRVEQALALSAEHLAALQAREEVRSRLDELTDREKDVM
KLVVEGVPNKLIADQLDISVRTVEVHRARVFDKMQVKSAVELANLLRNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 2e-17 41
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 2e-17 41
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 2e-17 41
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 2e-17 41
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_4745 YP_003280787.1 two component transcriptional regulator LuxR VFG0488 Protein 7e-18 41