|
Name : CtCNB1_4385 (CtCNB1_4385) Accession : YP_003280427.1 Strain : Comamonas testosteroni CNB-1 Genome accession: NC_013446 Putative virulence/resistance : Virulence Product : two component heavy metal response Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 4925995 - 4926702 bp Length : 708 bp Strand : + Note : COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain DNA sequence : TTGCTCGACAATCTGCGCATGAAGCTTCTAGTCATCGAGGACGAAACCAAACTCGCCGAATACTTGCAAAAAGGCCTGGG CGAGGAAGGCTTTGTGGTCGATGCCGCGCACAACGGCATTGACGGCCTGCATCTGGCCACCGAGCAGCCCTACGACCTCA TCATTCTGGACGGCATGCTGCCCGGCATAGACGGCCTGGCCGTGCTGGCGGCTCTGCGCCAGTCTCGCCAGACACCAGTG CTCATGCTCACGGCCCGCGCCCAGGTGGAAGACCGCGTCAAAGGACTGCAGGCCGGCGCCGATGACTACCTGGTCAAGCC TTTTGCGTTTTCAGAACTGGTGGCCCGCATTCATGCACTGCTGCGCCGTGGCCTGCAGGCCCAGGCCACGCCCGAAGCCA CTGTGCTGCGCATGGCCGATCTGGAGCTGGATCTGCTGCGTCACCGCGCCACGCGTGCTGGCCAGCGACTGGACCTGACG GCCAAGGAGTTCAATCTGCTGAGTCTGCTGCTGCGGCGCCAGGGCGAAGTGCTGTCACGCACCGAGCTGGCCTCCCAGGT CTGGGACATGAACTTCGACAGCGAAACCAATGTCGTCGAGGTCGCCGTGCGCCGCCTGCGCCTCAAGCTCGACGCGCCGT TCGAGCTGCCCCTGCTGCACACGGTGCGCGGCATGGGCTATGTGCTGGAGCTTCGCCTTGATGCCTGA Protein sequence : MLDNLRMKLLVIEDETKLAEYLQKGLGEEGFVVDAAHNGIDGLHLATEQPYDLIILDGMLPGIDGLAVLAALRQSRQTPV LMLTARAQVEDRVKGLQAGADDYLVKPFAFSELVARIHALLRRGLQAQATPEATVLRMADLELDLLRHRATRAGQRLDLT AKEFNLLSLLLRRQGEVLSRTELASQVWDMNFDSETNVVEVAVRRLRLKLDAPFELPLLHTVRGMGYVLELRLDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 1e-57 | 57 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 7e-57 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | BAC0083 | Protein | 9e-63 | 63 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | BAC0197 | Protein | 1e-67 | 62 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | BAC0638 | Protein | 3e-57 | 62 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | BAC0125 | Protein | 9e-66 | 61 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | BAC0111 | Protein | 3e-60 | 57 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | BAC0308 | Protein | 3e-57 | 56 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | BAC0347 | Protein | 4e-54 | 52 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | NC_002516.2.879194.p | Protein | 1e-32 | 43 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | HE999704.1.gene1528. | Protein | 1e-33 | 43 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | AE015929.1.gene1106. | Protein | 5e-35 | 42 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | NC_007793.3914065.p0 | Protein | 5e-39 | 42 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | NC_002758.1121390.p0 | Protein | 5e-39 | 42 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | NC_010079.5776364.p0 | Protein | 5e-39 | 42 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | NC_002952.2859858.p0 | Protein | 5e-39 | 42 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | NC_007622.3794948.p0 | Protein | 5e-39 | 42 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | NC_003923.1003417.p0 | Protein | 5e-39 | 42 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | NC_013450.8614146.p0 | Protein | 5e-39 | 42 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | NC_002951.3238224.p0 | Protein | 5e-39 | 42 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | CP000675.2.gene1535. | Protein | 1e-35 | 41 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | BAC0533 | Protein | 7e-27 | 41 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | NC_002695.1.915041.p | Protein | 4e-27 | 41 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | CP000647.1.gene4257. | Protein | 7e-27 | 41 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | CP000034.1.gene3834. | Protein | 4e-27 | 41 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | CP001138.1.gene4273. | Protein | 4e-27 | 41 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | AE000516.2.gene3505. | Protein | 2e-31 | 41 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | CP001918.1.gene5135. | Protein | 2e-24 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | VFG0596 | Protein | 5e-58 | 57 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | VFG1389 | Protein | 7e-39 | 47 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | VFG1390 | Protein | 1e-40 | 43 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | VFG1386 | Protein | 9e-37 | 43 |
| CtCNB1_4385 | YP_003280427.1 | two component heavy metal response | VFG0473 | Protein | 6e-32 | 42 |
