Gene Information

Name : CtCNB1_4259 (CtCNB1_4259)
Accession : YP_003280301.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Virulence
Product : TonB-dependent receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4771
EC number : -
Position : 4784141 - 4786336 bp
Length : 2196 bp
Strand : -
Note : COG4771, FepA, Outer membrane receptor for ferrienterochelin andcolicins

DNA sequence :
ATGTCCAACGCAGCTCTCAGCCGTGCCCGCCACATTCGCTGGCAACCCCGTTTACTGGCCCTGGCCGCTGCCGCCGCATG
CGCCGGCAATGCTTTTGCACAAGCCAGGGAGTCCACCATGGAGGAGGTGGTGGTCTCTGCCTCCGGCTTCGAGCAAGAGC
TGAAAAATGCCCCGGCCTCCATCTCCGTCGTGACGCGCCAGGAGCTTGAGACCAAGAACTTCCGCGATCTGGCCGAAGCC
CTGCAGGGCGTGGAAGGCATTGATGTGATGGGCGGAACCGGCAAGACCGGCGGCCTCGACATCAGCATCCGTGGCATGCC
CAGCGACTACACGCTGATCCTGATCGACGGGCGCCGCCAGAACGTGGCGGGCGACGTCACGCCCAACGGCTTCGGCGCCG
CACTGACCAGCTTCATGCCGCCCATGTCGGCCATCGAGCGTATCGAAGTCATTCGCGGCCCCATGTCCACGCTCTATGGC
TCGGACGCCATGGGCGGCGTGATCAACATCATCACGCGCAAGGTCAGCAAGGAGTGGGGCGGCGAAGTCAGCGTGGGCGC
CGGCATTCCGCAAGACAGCGAATGGGGCAACCAGTACAAGAGCAGCTTCTACATCAACGGCCCCATCAAGCAGGATCTGC
TGGGTCTGGCCGTGCGCGGCAGCACCTTCAACCGCGATGCGGCCGACTGGGTGCTGGCTCCTGGTGCCGCCCAGCCTGCA
CAGGCGCGCAACCCCGCGCCTGCGCAAAGCCGCCAGCACAGCCTGGGTGCCAAGCTGACACTGACGCCCAGCCGTTATCA
CGACATCTGGCTGGACGTGGACCAGGCCCGCACCTGGTACAACAACGAAGATGGCCGTCTGGGCAGCCGTGATGCACTCA
ATCCTGTCGACAAGAATGGCAATCCCGCTCCCCCCGGCTATCGAGATGCGCTGCGCTTCAACCGCGATCAGGTCAGCATC
GGCCATACCGGCCGCCTGGGCTTCGGCACGCTGGAAAGCAGCCTGATGCATACCGAAACCGAGACCATAGGTCGCACCAT
CCCCGGCGCGGCCGTTCCATCGGGTGATCCGCGTGCAGGTACAGACCGCGAACTCAAGACCACCAATCTGGTACTGGACA
GCAAGCTGGTGGCACCCATGGGCGATGCCCATATGCTGACCGTGGGCGGCCAGTTCTGGGATGCCAAGCTCAAGGACGGG
CTGCTGCCGCAAAGCCACAAGCAGACCATGTGGGCGCTGTTCGTGGAAGACGAATGGCGTCTGCGCCAGGGCCTGACCGC
CACGCTGGGCGGCCGCTATGACCACCATGATGCCTTTGGCGGCCAGTTCAGCCCGCGTGCCTATCTGGTCTGGGATGCAA
CGACGAACTGGACCTTCAAGGGCGGCGTGAGCCAGGGCTTCAAGGCGCCGCGCCTGAATCAGCTGATCGACGGTGTCAGC
GGCGTGACCGGCCAGGGCAAGACCATCAGCATCGGCAACCCCAATCTCAAGCCTGAGACCAGCACCAATGTGGAGCTGTC
GGCCCTGTATGACAACAAGGCGGGCTGGAGCAGCGCGGCCACCTTCTTCCATAACGATGTCAAGGACAAGATCGCCTCGG
GCGGCTCCTGCGCCACGGCAGCCATCTCCAGCTGCGCTTACAACCCCACGGCCGATTACTCCATCAATGTGGACAAGGCC
AAGACCTGGGGTCTGGAGCTGAGCAGCCGCGCCCAGCTGGCCAAGGACTGGGCCGTCAAGGCCGGCTACACCTGGACCAA
TAGCGAGGTGATCGAGAGCGGCGTCAAGAACGGTCAGCTGGCCAATACCGCCAAGCATATTGCCAGCGCCCAGTTGGACT
GGACCCCGAGCGGCCAGTGGCGTCTGTGGGCGCGCGGCGAGTACCGTAGCAAGAGTCCGCGCTTCAGCGGCTCCTACGAC
AACTTGAGCAAGGCCAACAGGGACGTGTATGACGCCGTGGGCGATATCAAGGGCTATGCGCTGTTCCATCTGGGAGGCAG
CTATCAGGTCAACAAGAGCCTGAGCATCAACGCCAGTATCTTCAATCTGTTCGACAAGGACTTCCGCAAGTATCAGCAGG
TGAGCGTCAACGGCACGCCGACCTGGGTGAACAGCTATTTCCAGGGCGGCCAGAGTGTGTCGGGCGTGACCCAGGCCGGT
CGTACCTTCTGGATCACGGCGAACATGAAGTTCTGA

Protein sequence :
MSNAALSRARHIRWQPRLLALAAAAACAGNAFAQARESTMEEVVVSASGFEQELKNAPASISVVTRQELETKNFRDLAEA
LQGVEGIDVMGGTGKTGGLDISIRGMPSDYTLILIDGRRQNVAGDVTPNGFGAALTSFMPPMSAIERIEVIRGPMSTLYG
SDAMGGVINIITRKVSKEWGGEVSVGAGIPQDSEWGNQYKSSFYINGPIKQDLLGLAVRGSTFNRDAADWVLAPGAAQPA
QARNPAPAQSRQHSLGAKLTLTPSRYHDIWLDVDQARTWYNNEDGRLGSRDALNPVDKNGNPAPPGYRDALRFNRDQVSI
GHTGRLGFGTLESSLMHTETETIGRTIPGAAVPSGDPRAGTDRELKTTNLVLDSKLVAPMGDAHMLTVGGQFWDAKLKDG
LLPQSHKQTMWALFVEDEWRLRQGLTATLGGRYDHHDAFGGQFSPRAYLVWDATTNWTFKGGVSQGFKAPRLNQLIDGVS
GVTGQGKTISIGNPNLKPETSTNVELSALYDNKAGWSSAATFFHNDVKDKIASGGSCATAAISSCAYNPTADYSINVDKA
KTWGLELSSRAQLAKDWAVKAGYTWTNSEVIESGVKNGQLANTAKHIASAQLDWTPSGQWRLWARGEYRSKSPRFSGSYD
NLSKANRDVYDAVGDIKGYALFHLGGSYQVNKSLSINASIFNLFDKDFRKYQQVSVNGTPTWVNSYFQGGQSVSGVTQAG
RTFWITANMKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r4 AAC61730.1 exogenous ferric siderophore receptor R4 Not tested PAI I CFT073 Protein 1e-120 43
unnamed CAC39288.1 hypothetical protein Not tested LPA Protein 3e-120 43
Z1617 NP_287121.1 bifunctional enterobactin receptor/adhesin protein Not tested TAI Protein 1e-120 43
c3610 NP_755485.1 bifunctional enterobactin receptor/adhesin protein Not tested PAI I CFT073 Protein 9e-121 43
ECUMN_3356 YP_002414032.1 bifunctional enterobactin receptor/adhesin protein Virulence Not named Protein 9e-121 43
iha AAF36432.2 adhesin Virulence TAI Protein 8e-121 43
Z1178 NP_286713.1 bifunctional enterobactin receptor/adhesin protein Virulence TAI Protein 1e-120 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_4259 YP_003280301.1 TonB-dependent receptor VFG1731 Protein 4e-121 43