Gene Information

Name : CtCNB1_3969 (CtCNB1_3969)
Accession : YP_003280011.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4447347 - 4447976 bp
Length : 630 bp
Strand : -
Note : COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGATCGGCCAGGCCGTGCTGGCGCTGCTGCGCCGTGAAGGCTATGTGGTGGACTGGGTTCAGGATGGCGCCCAGGCCGA
TACAGCCTTGTATGGCCACCAGTACGATCTGGTGCTGCTCGACTTGGGCTTGCCCAAGCTTGATGGCTTGCAGGTGCTGC
GCCAGTTGCGTGCGCGCAAGGATGCCACGCCGGTGCTGGTGGCGACCGCCAGGGATGCCGTGCATGACCGCATTGCGGGG
CTGGACGCCGGGGCCGATGACTATGTCATCAAACCCTATGACATGGATGAGCTGCTGGCCCGCATTCGCGCGCTAACGCG
GCGTGCGGCAGGGCATCTGGATGCGGTGTACGAACATGGCGGCGTCATGCTGAACCCCAATACTCGCGAGGCCAGCGTGA
ATGGCCAGCCGGTCACTCTGTCTGGTCGTGAATGGGCAGTGCTGCAGGCGTTGCTGGCAAGGCCGGGGGCCACGCTGTCA
CGTCAGCAAATCGAAGACAAACTCTATGGCTGGGGCGATGAGGTCAGCAGCAATGCGGTGGAGGTCTATATCCACGGGTT
GCGTAAAAAGCTCGGCGCTGCCGCAGTGCTCAATGTGCGCGGTCTTGGCTATATGGTGCCCAGGCCATGA

Protein sequence :
MIGQAVLALLRREGYVVDWVQDGAQADTALYGHQYDLVLLDLGLPKLDGLQVLRQLRARKDATPVLVATARDAVHDRIAG
LDAGADDYVIKPYDMDELLARIRALTRRAAGHLDAVYEHGGVMLNPNTREASVNGQPVTLSGREWAVLQALLARPGATLS
RQQIEDKLYGWGDEVSSNAVEVYIHGLRKKLGAAAVLNVRGLGYMVPRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-22 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_3969 YP_003280011.1 two component transcriptional regulator VFG0473 Protein 6e-25 44