Gene Information

Name : CtCNB1_3809 (CtCNB1_3809)
Accession : YP_003279851.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 4286560 - 4286946 bp
Length : 387 bp
Strand : -
Note : COG2963, transposase and inactivated derivatives

DNA sequence :
ATGACTAGACATACAGAGACGATTGAGGTCATCACCCGAGACCAGCGCAGGCGGCGCTGGTCGGCTGCCGAGAAGGCTGC
CTTGGTTCGCAAAACGTATGAACCGGGCATGAGCGTCTCGCTCGTGGCCCGCCAGGAGGGCGTGTCAGCGAGCTTGCTAT
TCACTTGGCGGCGACTGGATCGCGAAGGCGCGCTGGTGGCCGTGAGTGCCGGCGAAGCGGTTGTGCCGGCTTCGGAGCTG
GCGGCAGCTCGCGCCGAGATCGCCAAGCTGCAACGTGTGCTGGGCAAAAAGACCTTGGAGAACGAGATCCTCAAGGAAGC
CGTGGAGCTCGCCGCTGCAAAAAAGTGGATTGCGCGCTCGCCCTTGTTGCCAGGGGACGACCAATGA

Protein sequence :
MTRHTETIEVITRDQRRRRWSAAEKAALVRKTYEPGMSVSLVARQEGVSASLLFTWRRLDREGALVAVSAGEAVVPASEL
AAARAEIAKLQRVLGKKTLENEILKEAVELAAAKKWIARSPLLPGDDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 1e-12 65
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 1e-12 65
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 9e-13 65
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 9e-21 63
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 9e-21 63
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 6e-21 63
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 6e-21 63
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 6e-21 63
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 9e-21 63
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 3e-20 62
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 7e-21 62
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 5e-21 62
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 2e-14 62
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 2e-20 61
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 2e-20 61
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 2e-14 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_3809 YP_003279851.1 transposase IS3/IS911 VFG0648 Protein 2e-21 62
CtCNB1_3809 YP_003279851.1 transposase IS3/IS911 VFG0622 Protein 6e-21 61
CtCNB1_3809 YP_003279851.1 transposase IS3/IS911 VFG0609 Protein 6e-21 61
CtCNB1_3809 YP_003279851.1 transposase IS3/IS911 VFG1733 Protein 5e-15 60