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Name : CtCNB1_3549 (CtCNB1_3549) Accession : YP_003279591.1 Strain : Comamonas testosteroni CNB-1 Genome accession: NC_013446 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 4015695 - 4016993 bp Length : 1299 bp Strand : + Note : COG0389, DinP, nucleotidyltransferase/DNA polymerase involved in DNA repair DNA sequence : ATGTTCGCCCTTATCGACGGCAACAACTTCTATGTCAGCTGCGAGCGGGCTTTCAGGCCTGCCCTGCAGGGCATCCCCGT TGTCGTCCTGAGCAATAACGACGGTTGTGCCATCTCGCGCTCCGACGAGGCCAAAGCCTTGGGCGTGAAAATGGGACAGC CGTTTTTTCAATTGCGCGACCTGGTCGAGCACAAGGGGCTTGTCTGCCTCTCAGCAAACTTTGAGCTGTACGGCGACATG AGCGACCGCATGATGTCGCTGGCTGCCGGCCTGGGCCCCACCCAAGAGATCTACAGCATTGACGAGTCATTCATCGGGGA TCTGGACGGCGTGCGAGATCTCACGCGCCGCGCCTTTGCCATTCGCGCCCGCATCCTGAAATGGACGGGCATCCCTACTT GTGTGGGCCTGGCGCCCACCAAGACCCTGGCCAAGCTCTGCAACCATGTCGCCAAGGACTCGGAGCGCAAGCCTGGCAGC TACCCCGCCGAGCTGCAGCGGGTCTGCAACTGGGCCGAGCTGTCCGAGCAGCAACGCACAGACATTCTCGGCCGCACCGC CGCTGGCGAGATCTGGGGCGTGGGCCGGCGCATCTCTGTCCAGTTGGCTGAGCAAGGCGTGCTGACCGCGTTGGACCTGG CCAGGCTGCCCGCCCATGCCGCGCGCGATGGCTGGAGCGTGGTGCTGGAGCGCACCGTGCGCGAGCTGCAAGGCGTGAGC TGCATGAGCTTGGAGACGGCACCAGCTGCCAAAAAGCAGATTGCGTGCACACGCAGCTTCGGCCACCCCATCACCACCCT GCCCCCATTGATTGAAGCCGTGAGCGAATTTGCAACCAGGGCTGCAGAAAAACTGCGCGCTGGCGGTTTGCGTGCTGGTG CCCTGCATGTTTTCGTGCACACATCGCCATTTAGGCCCGGCCGCAGGTTCTACGAAACGGCAGTGATTCAACTCCAGCCG CCCTCCTCCGACACCAAGGCGCTAGTGAATGCAGCCGTGCACGGCTTGCGATCGATCTACCAGCCTGGCTACCAACTATC CAAGGCCGGCGTCATGCTGCAAGACCTGTGCCCCACAGAAGTGCAGCAAGGCGATCTGCTCTTTCAGGAACCCTGCCGCG ATCAAAGCAAGCTGATGGAAGCCATGGACAAGATCAACAAGCGCTTCGGCAAGGGCACGGTGCATGTCGCCAGTACCGGC GTGCCCGAGCAGGATGAAAGCGGCTGGCGGATGCGCCAAGAGCGCCGCACACCGCGCTACACCACCAAGATTGATGAAAT TCCGATAGCGAGGGCTTAG Protein sequence : MFALIDGNNFYVSCERAFRPALQGIPVVVLSNNDGCAISRSDEAKALGVKMGQPFFQLRDLVEHKGLVCLSANFELYGDM SDRMMSLAAGLGPTQEIYSIDESFIGDLDGVRDLTRRAFAIRARILKWTGIPTCVGLAPTKTLAKLCNHVAKDSERKPGS YPAELQRVCNWAELSEQQRTDILGRTAAGEIWGVGRRISVQLAEQGVLTALDLARLPAHAARDGWSVVLERTVRELQGVS CMSLETAPAAKKQIACTRSFGHPITTLPPLIEAVSEFATRAAEKLRAGGLRAGALHVFVHTSPFRPGRRFYETAVIQLQP PSSDTKALVNAAVHGLRSIYQPGYQLSKAGVMLQDLCPTEVQQGDLLFQEPCRDQSKLMEAMDKINKRFGKGTVHVASTG VPEQDESGWRMRQERRTPRYTTKIDEIPIARA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 2e-70 | 43 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 2e-70 | 43 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 5e-74 | 42 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 3e-56 | 41 |
