|
Name : CtCNB1_3489 (CtCNB1_3489) Accession : YP_003279531.1 Strain : Comamonas testosteroni CNB-1 Genome accession: NC_013446 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 3943148 - 3945739 bp Length : 2592 bp Strand : + Note : COG0249, MutS, Mismatch repair ATPase (MutS family) DNA sequence : ATGATGCAGCAGTACTTCAAGCTCAAAGCCGACCACCCCGACACGCTGGTTTTCTACCGCATGGGAGACTTTTACGAGCT GTTCTTTGGCGATGCCGAAAAAGTCACGCGCCTGCTGGACATCACGCTGACCACGCGCGGCCAGACCGCAGGCCAGCCTA TTCCCATGGCCGGCGTTCCGTTCCACGCCCTGGAAAACTATCTGGGCCGCCTGATCAAGATGGGCGAGTCGGTGGCGATC TGCGAGCAGGTCGGCGAAATCGGCGTGGGCAAGGGTCCGGTGGAGCGCAAGGTCGTGCGCGTGGTCACGCCCGGCACACT GACGGACAGCGAGCTGCTTTCCGACAAGAGCGAAGCCATTCTGCTGGCCCTGCACACCGCAGGCCGCCAGCGCGTGGGAC TGGCCTGGATGGCCATGACCCAGGGCCGCATTCACATGGCCGAATGCGCGGCCGATGAACTGGGCGCCTGGCTGTCCCGC ATCGCGCCCAGCGAAGTGATCTACAGCGCCGGAGTCACCGAGCGCTTCGAGCAAGCCCTGTTTGCCGTCAAGCACAGCGG CGCCATCAGTTGCCCTCTGTCGCCCCGCCCTGACTGGCAGTTTGACTCGGGCCTCGGCGAGCGCAAGCTGCTGGAGCTGC TGGGCGCGGCCAGCCTCAAGGCCTGGGAGGCCGAAGGTCTGCCGCTTGCCCATGGTGCCGGTGCCGCCCTGCTGTCCTAT GCCGAACATACCCAGGGCCGCAATCTCACCCATATCCACGCCATCCAGGTACAGCGTGACGACGAGCTGATTGCCCTGCC GCTGGCCACGCGCCGCAATCTGGAGCTGGTCAAGACGCTGCGCGGCGAAGATGCGCCCACGCTGTTTTCGCTGCTGGACA GCTGCATGACCGGCATGGGCAGCCGCCTGCTCAAGACCTGGCTGCTGGAGCCCGAACGCAATCGCAAGGCAGCCATGCAG CGCCTGGAAGCAATTGGCGTGCTGCGCGGCACCGGGGCAGGCATGCCCCCCTGGCAAGCCCTGCGCGCCGAGCTCAAGGG CGTGAGCGATGTGGAGCGCATTACCGCCCGCATCGCCCTGCGCCAGGTGCGCCCGCGCGAGCTGGTGGGCCTGTCCAAAA CACTGGAAAAAGCGAAGCTGCTGGCGCAGTCCGGACAGGCGCCGTCGGCCTATCTGACGCAGATCTTCAGCGACCTGATT CCGCCCGAAGGCTGTGCCGAGCTGCTGGCGCGCGCTATTCATGAAGAGCCCGCAGCGCTGGTGCGTGACGGCGGCGTGAT CGCCACGGGCTTTGACGCCGAACTCGACGAGCTGCGCGCCATCCAGAACAACTGCGACGAGTTTCTGCTGGAGCTGGAGG CCAAGGAAAAGCTGCTCACCGGCATTCCCAACCTGCGCGTGCAGTTCAACAAGGTGCATGGCTTCTATATCGAGGTCACC AACAGCTACAAGGATGCGGTACCCGAGCGTTTTCGCCGCCGCCAGACGCTCAAGAACGCCGAGCGTTACATCACGCCCGA GCTCAAGGCTTTCGAGGACAAGGCCTTGTCGGCCCAGGAGCGAGCGCTGCAGCGCGAGAAGTTCCTGTTCGAGCAGCTGC TCGACCAGCTTCAGCCCCATGTGCCCCAGCTCACGCGCGTGGCCCAGGCGATTGCCGCACTGGACGTTCTGTGCACGCTG GCCGAGCGCTCGCTGACGCTGAACTGGGCCGAGCCGCAGTTCGTCAGCCAGCCCTGCATAGAGATCGAGGCTGGCCGCCA CCCCGTGGTGGAAGCACGCATGGCAGAGACCTCCAGCGGCAGCTTCATCGCCAACCACACGCGCATGAATCTCAACACGC GCATGCAGATCATCACCGGCCCGAACATGGGCGGCAAATCGACCTATATGCGCCAGGTGGCCTTGATCGTGCTGCTGGCC AGCATGGGCAGCTATGTGCCCGCCGGCGCTTGCCGTCTGGGGCCCATCGATGCCATCCACACGCGTATCGGCGCCGCCGA CGATCTGGCCAATGCCCAGTCCACCTTCATGATGGAGATGACCGAGGCCGCGCAGATTCTGCATTCGGCCACGCCCCACT CCCTGGTGCTGATGGACGAGATCGGCCGCGGCACCAGCACCTTCGACGGACTGGCCCTGGCCAGCGGCATTGCCAGCCAG CTGCACGACAAGACCAAGGCCTTCACGCTGTTTGCCACGCACTACTTCGAGCTGACCGAGCTGCCCGCCAAGGCCAAGGC CGCCGTCAACGTGCATGTCAGCGCAGCGGAGTCGGGCAGCGACATCGTGTTTCTGCACGAGATTCAGGCCGGCCCCGCCA GTCGCAGCTACGGTATCCAGGTCGCCAAGCTGGCCGGTATGCCCGCAGGCGTTCTCAACCATGCGCGCCATGCGCTGGAG GCACTCGAATCCCAGGCCGGCGAGAACGAGCTGCAGGTCAATCTGTTCGATGCACCGGAGCTGGTGGACGCAAGCGCCGC GCCCAGCCCGCTGGATCAGGCCATGGCCGACGTCAACCCCGATGCGCTGAGCCCGCGCGAAGCGCTGGAAGTGCTCTACC AGCTCAAGAAACTGAGCGCCGGCACCGCCTAA Protein sequence : MMQQYFKLKADHPDTLVFYRMGDFYELFFGDAEKVTRLLDITLTTRGQTAGQPIPMAGVPFHALENYLGRLIKMGESVAI CEQVGEIGVGKGPVERKVVRVVTPGTLTDSELLSDKSEAILLALHTAGRQRVGLAWMAMTQGRIHMAECAADELGAWLSR IAPSEVIYSAGVTERFEQALFAVKHSGAISCPLSPRPDWQFDSGLGERKLLELLGAASLKAWEAEGLPLAHGAGAALLSY AEHTQGRNLTHIHAIQVQRDDELIALPLATRRNLELVKTLRGEDAPTLFSLLDSCMTGMGSRLLKTWLLEPERNRKAAMQ RLEAIGVLRGTGAGMPPWQALRAELKGVSDVERITARIALRQVRPRELVGLSKTLEKAKLLAQSGQAPSAYLTQIFSDLI PPEGCAELLARAIHEEPAALVRDGGVIATGFDAELDELRAIQNNCDEFLLELEAKEKLLTGIPNLRVQFNKVHGFYIEVT NSYKDAVPERFRRRQTLKNAERYITPELKAFEDKALSAQERALQREKFLFEQLLDQLQPHVPQLTRVAQAIAALDVLCTL AERSLTLNWAEPQFVSQPCIEIEAGRHPVVEARMAETSSGSFIANHTRMNLNTRMQIITGPNMGGKSTYMRQVALIVLLA SMGSYVPAGACRLGPIDAIHTRIGAADDLANAQSTFMMEMTEAAQILHSATPHSLVLMDEIGRGTSTFDGLALASGIASQ LHDKTKAFTLFATHYFELTELPAKAKAAVNVHVSAAESGSDIVFLHEIQAGPASRSYGIQVAKLAGMPAGVLNHARHALE ALESQAGENELQVNLFDAPELVDASAAPSPLDQAMADVNPDALSPREALEVLYQLKKLSAGTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 1e-159 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CtCNB1_3489 | YP_003279531.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 1e-172 | 48 |
