Gene Information

Name : CtCNB1_3135 (CtCNB1_3135)
Accession : YP_003279177.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Unknown
Product : FAD dependent oxidoreductase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2072
EC number : -
Position : 3554591 - 3555643 bp
Length : 1053 bp
Strand : -
Note : COG2072, TrkA, Predicted flavoprotein involved in K+ transport

DNA sequence :
ATGTCGTTTCACGATGTGATCATCGTTGGGGCAGGTCAAGCAGGCCTATCGGTGGCGTACTTCCTGCGTCGCTCCAATCT
GTCGGTGCTGCTGCTGGATGCCGAGGAAGCCGGAGGCGGGGCCTGGCAGCATGGATGGGACTCGCTGAGGCTTTTTTCTC
CCGCTTCCTGGAGTTCCATCGCGGGATGGCCAATGCCTGCTTCGGGTGAGCAATATCCAAGTCGTGACCATGTGGTTGAC
TATCTTCGCAAGTACGAAGCACGCTACGAACTCAAGATCGAGAGGCCGGTATGCGTCACAGGCATTGAACCTACTGAGCA
AGGCTTCCAGGTCAATGCCGGAGTGAGAAGCTGGCATTCGCGTGCCGTTGTATTTGCCACGGGAACATGGCGAAATCCAT
TTGTCCCCAACGTTGAGGGTTTGATGTCCTTCAAGGGGCAACAGTTGCACTCACCTCAGTACGCATCTCCTGAGCCGTTC
ACAGGCAAGAGGGTGATGGTGGTCGGCGGAGGAAACTCCGGCGCACAGATCCTGGCGGAGGTCTCGCTTGTTGCGCAGTC
CACGACCTGGGTCACGCTGGAGCCTCCAGCCTTTTTACCGGACGAGGTCGATGGGCGAGTACTCTTCGAGAGGGCTACCG
CACGCTGGCAGGCATTGCAGGAAGGCAAAGATCCGGAGAGCCTGCCAGGCGGCTTTGGCGATATCGTGATGGTTCCCCCT
GTCCTTGACGCACGCCTGCGCGGCGTGCTGCATTCTGTCGGCTCATTTGAGAAGCTCATGGCGGACGGGGCTCAATGGGG
CGACGGAAGTACCGAGCCCTTCGACGCGATCATCTGGTGTACCGGCTTTAGGCCTGCGTTACAGCCTCTGGAGACTCTTG
GCGTTGTCAACGAATCCAGAGTCACGGTAGACGGCACACAGGTGCATGGCGTCTCTGGTTTATGGCTTGTGGGCTACGGT
GAGTGGACCGGGCCAGCGTCTGCCACGCTCATTGGAGTCATGCGCACAGCTCGTAGCACAGCAAGCGAGATTACGCGGTA
CCTATCGGACTGA

Protein sequence :
MSFHDVIIVGAGQAGLSVAYFLRRSNLSVLLLDAEEAGGGAWQHGWDSLRLFSPASWSSIAGWPMPASGEQYPSRDHVVD
YLRKYEARYELKIERPVCVTGIEPTEQGFQVNAGVRSWHSRAVVFATGTWRNPFVPNVEGLMSFKGQQLHSPQYASPEPF
TGKRVMVVGGGNSGAQILAEVSLVAQSTTWVTLEPPAFLPDEVDGRVLFERATARWQALQEGKDPESLPGGFGDIVMVPP
VLDARLRGVLHSVGSFEKLMADGAQWGDGSTEPFDAIIWCTGFRPALQPLETLGVVNESRVTVDGTQVHGVSGLWLVGYG
EWTGPASATLIGVMRTARSTASEITRYLSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trkA CAJ77013.1 putative monooxygenase Not tested AbaR1 Protein 2e-92 53
trkA AFC76430.1 TrkA Not tested AbaR5 Protein 3e-92 53
trkA ADZ05764.1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase Not tested AbaR11 Protein 5e-89 52