Gene Information

Name : CtCNB1_2945 (CtCNB1_2945)
Accession : YP_003278987.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 3347178 - 3347834 bp
Length : 657 bp
Strand : -
Note : COG4181, Predicted ABC-type transporter involved in lysophospholipase L1 biosynthesis

DNA sequence : 
TTGATTGCCGTTGAGCAACTGTCCAAATCGGTGAGCGATTCCACAGGCGTGCTGGATATTTTGCGGGATATCAATCTGAG
TTTCACGGCCGGCGAAACCGTTGCCATTGTGGGTGCCTCGGGCTCGGGTAAAAGCACTTTGCTGTCGATTCTGGCCGGCC
TCGATACCCCCAGTCGCGGCACGGTCCGCTTGCTGGGCCAGGATCTGTTTGCACTCAGCGAGGACGACAGGGCGGCGGTG
CGGGCACAGAAGATGGGCTTTGTCTTCCAGAGCTTTCAGTTGCTGGGCAATCTCACGGCGCTGGAAAACGTCATGCTGCC
GCTGGAGCTGGCGGGTCAGCGCGATGCGAGAGCACGAGCTTCGCAGATGCTGGAGCGCGTGGGCCTGGGCCAGCGTCTCA
ATCACTATCCCAGGCTGATGTCGGGCGGCGAGCAGCAGCGCGTGGCCCTGGCGCGTGCTTTTGTGGTGGAGCCGGCCGTG
CTGCTGGCCGACGAGCCCACCGGCAGCCTGGACTTCGCCACGGGCCAGACCATCATGGAGCTGATGTTTGCGCTCAACCG
CGAGCGCGGCACGACTCTGATTCTGGTGACGCATGACCGCGAGATTGCGGCGCAATGTGATCGAAGCATCACCATAGAAG
CCGGGCGCTCTGTCTGA

Protein sequence : 
MIAVEQLSKSVSDSTGVLDILRDINLSFTAGETVAIVGASGSGKSTLLSILAGLDTPSRGTVRLLGQDLFALSEDDRAAV
RAQKMGFVFQSFQLLGNLTALENVMLPLELAGQRDARARASQMLERVGLGQRLNHYPRLMSGGEQQRVALARAFVVEPAV
LLADEPTGSLDFATGQTIMELMFALNRERGTTLILVTHDREIAAQCDRSITIEAGRSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-25 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_2945 YP_003278987.1 hypothetical protein NC_008702.1.4606598. Protein 6e-35 52
CtCNB1_2945 YP_003278987.1 hypothetical protein NC_012469.1.7686878. Protein 4e-41 48
CtCNB1_2945 YP_003278987.1 hypothetical protein NC_012469.1.7685735. Protein 3e-35 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_2945 YP_003278987.1 hypothetical protein VFG2059 Protein 5e-16 43