Gene Information

Name : CtCNB1_2683 (CtCNB1_2683)
Accession : YP_003278725.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3061586 - 3062230 bp
Length : 645 bp
Strand : -
Note : COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain

DNA sequence : 
TTGGTCGCCAGCGGGGTGAAGGCGGGCCTGCAGCTACAGGGCTTTGGCGTGGACGTGGTGGGTTGCGCCAGCCAGGCTGA
TGCGGCACTCAAATCCTCCCACTTCGATGTATGTGTGCTGGATCTGGGTCTGCCCGATGAGGACGGTCTGCATCTGCTGG
CGCGGTGGCGCCGTCAGGGGCTGGAGCTGCCGGTGCTGGTGCTGACCGCACGTGATGCCGTGGACCAGCGCATCGAAGGC
TTGCAGACCGGAGCTGACGACTATCTGGTCAAGCCCTTCGATCTGCACGAGCTGGCGGCGCGGCTGCATGCGCTGCTGCG
ACGGGCGGCGGGGCGTACCGTGGACTGGATTGTGCTGGGCGATGTCAAAGTGGATCTGGCCGCTGGCCAGGCCATACGGG
AGGGCAGCATCGTGGACCTGTCGCGTCGTGAATGGGCATTGCTGCGCGCGCTGCTGCAGTCGCCCGGGCGAGTGCTGAGC
CTGGAGCAACTGCGCGACAGCCTCTATGGCTACAGCCTTGATGTGGAAAGCAACGCAGTCAATGTGCATGTGCACCATCT
GCGTCGCAAGCTGGGCTCGGACATGGTGGAGACCGTGCGTGGTGTGGGCTTCAGATTGGGGCGCGTGCAGGGAGGCAGTT
GCTGA

Protein sequence : 
MVASGVKAGLQLQGFGVDVVGCASQADAALKSSHFDVCVLDLGLPDEDGLHLLARWRRQGLELPVLVLTARDAVDQRIEG
LQTGADDYLVKPFDLHELAARLHALLRRAAGRTVDWIVLGDVKVDLAAGQAIREGSIVDLSRREWALLRALLQSPGRVLS
LEQLRDSLYGYSLDVESNAVNVHVHHLRRKLGSDMVETVRGVGFRLGRVQGGSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-33 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_2683 YP_003278725.1 two component transcriptional regulator BAC0487 Protein 1e-32 44
CtCNB1_2683 YP_003278725.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-18 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_2683 YP_003278725.1 two component transcriptional regulator VFG0473 Protein 3e-30 44