Gene Information

Name : CtCNB1_2597 (CtCNB1_2597)
Accession : YP_003278639.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Resistance
Product : beta-lactamase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2602
EC number : -
Position : 2966741 - 2967490 bp
Length : 750 bp
Strand : -
Note : COG2602, beta-lactamase class D

DNA sequence :
GTGACGGCGGCAGGCCCCCAGCCTCAAGAAATGGCCGAGTGGTCTCGGTTTTTCACAGAAGCCGATGCGCAAGGCAGCAT
CGTTGTTCTCGATGCACGCGATAACTCTGAAACTACCCACGTCTACAACGTGTCGCGTTCCGCTCGGCGTTACTCGCCAG
CCTCTACCTTCAAGATTCCGCACAGCCTGTTTGCGCTTGATGCAGGGCTGCTGCGTGATGAATTTCAGCTTATTCAATGG
GATGGCGTGAAACGACCTGTGGAGGCCTGGAACGTGGACCAGAATCTGCGCTCCGCGATGAGGAACTCCACCGTCTGGGT
GTATGAGCGCTTCGCCAAGGAACTCGGCGATGCACGTGAGACCGCCTATATGCGAAAGATTGGGTATGGCAATGCGGTCG
CCACTGGCGACAAGCCATTCTGGGTTGAGGGCGACCTCGCCATCTCATCCTTCGAGCAGATTGCTTTCTTGCAACGGCTT
TACCGCAATCAACTGCCTTTCCAGGTCGAGCACCAGCGGCTTGTGAAGGACGTGATGGTCAATGAAGCAGGACCTGACTG
GATACTGCGTGCAAAAACGGGCTGGACCGGAAAAATCGGCTGGTGGGTGGGCTGGGTAGAGTGGCCCAGCGGCCCCGTCT
TCTTCGCCTTGAACATGGACACTCCCAACAGACTTGCCGACCTTGCCAAACGGCAAAGCATCACACGCAATATTCTGCGC
TCCATTAAAGCGCTACCCACTTCAGCATAG

Protein sequence :
MTAAGPQPQEMAEWSRFFTEADAQGSIVVLDARDNSETTHVYNVSRSARRYSPASTFKIPHSLFALDAGLLRDEFQLIQW
DGVKRPVEAWNVDQNLRSAMRNSTVWVYERFAKELGDARETAYMRKIGYGNAVATGDKPFWVEGDLAISSFEQIAFLQRL
YRNQLPFQVEHQRLVKDVMVNEAGPDWILRAKTGWTGKIGWWVGWVEWPSGPVFFALNMDTPNRLADLAKRQSITRNILR
SIKALPTSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
blaOXA-2 YP_005176242.1 beta-lactamase OXA-2 protein Not tested ICEPmu1 Protein 2e-76 64
ACICU_00226 YP_001844885.1 Beta-lactamase class D Not tested AbaR20 Protein 2e-77 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_2597 YP_003278639.1 beta-lactamase AF300985.1.gene1.p01 Protein 2e-73 65
CtCNB1_2597 YP_003278639.1 beta-lactamase AF350424.1.gene1.p01 Protein 4e-72 64
CtCNB1_2597 YP_003278639.1 beta-lactamase EF552405.1.gene1.p01 Protein 2e-76 64
CtCNB1_2597 YP_003278639.1 beta-lactamase GQ202693.1.gene2.p01 Protein 9e-77 64
CtCNB1_2597 YP_003278639.1 beta-lactamase JF795487.1.gene1.p01 Protein 7e-76 64
CtCNB1_2597 YP_003278639.1 beta-lactamase M95287.gene.p01 Protein 8e-77 64
CtCNB1_2597 YP_003278639.1 beta-lactamase AY289608.1.gene2.p01 Protein 5e-77 64
CtCNB1_2597 YP_003278639.1 beta-lactamase AF315351.1.gene2.p01 Protein 2e-76 64
CtCNB1_2597 YP_003278639.1 beta-lactamase U63835.1.gene1.p01 Protein 8e-77 64
CtCNB1_2597 YP_003278639.1 beta-lactamase L07945.1.gene1.p01 Protein 6e-77 63
CtCNB1_2597 YP_003278639.1 beta-lactamase JF800667.1.gene2.p01 Protein 8e-76 62
CtCNB1_2597 YP_003278639.1 beta-lactamase DQ522237.1.gene5.p01 Protein 1e-76 62
CtCNB1_2597 YP_003278639.1 beta-lactamase Y10693.2.gene1.p2 Protein 1e-76 62
CtCNB1_2597 YP_003278639.1 beta-lactamase AY139598.1.gene3.p01 Protein 2e-76 61
CtCNB1_2597 YP_003278639.1 beta-lactamase AF371964.1.gene1.p1 Protein 3e-76 61
CtCNB1_2597 YP_003278639.1 beta-lactamase AF317511.1.gene5.p01 Protein 1e-75 61
CtCNB1_2597 YP_003278639.1 beta-lactamase AF024602.1.gene3.p01 Protein 1e-77 60
CtCNB1_2597 YP_003278639.1 beta-lactamase HQ700343.1.gene1.p01 Protein 6e-45 44
CtCNB1_2597 YP_003278639.1 beta-lactamase AY500137.1.gene1.p01 Protein 1e-43 44
CtCNB1_2597 YP_003278639.1 beta-lactamase HM015773.1.gene6.p01 Protein 2e-43 44
CtCNB1_2597 YP_003278639.1 beta-lactamase JN205800.1.gene6.p01 Protein 2e-43 44
CtCNB1_2597 YP_003278639.1 beta-lactamase X58272.1.gene1.p01 Protein 4e-41 41