|
Name : CtCNB1_2516 (CtCNB1_2516) Accession : YP_003278558.1 Strain : Comamonas testosteroni CNB-1 Genome accession: NC_013446 Putative virulence/resistance : Unknown Product : transposase Tn3 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4644 EC number : - Position : 2878885 - 2881851 bp Length : 2967 bp Strand : + Note : COG4644, transposase and inactivated derivatives DNA sequence : ATGCCACGTCGTTCAATCCTGTCCGCCGCCGAGCGCGAAAGCCTGCTGGCGTTGCCGGACACCAAGGATGAGTTGATCCG TCACTACACGTTCAGCGAAACCGACCTCTCCATCATCCGGCAGCGGCGCGGCCCGGCCAACCGGCTGGGCTTCGCCGTGC AGCTCTGTTACCTGCGCTTTCCTGGTGTCATCCTGGGCGTCGATGAGCCGCCGTTTCCGCCCTTGTTGAAACTGGTCGCC GACCAGCTCAAGGTCAGCGTCGAAAGCTGGGACGAATACGGGCAGCGGGAGCAGACCCGGCGCGAGCACCTGGTCGAACT GCAAACGGTGTTCGGCTTCCAGCCCTTTACCATGGGCCACTACCGGCAGGCCGTCCAGTTGCTGACCGAGATGGCCTTGC AGACCGACAAGGGCATCGTGCTGGCCAGCACCTTGATCGAGCACCTGCGGCAGCAGTCGGTCATTCTGCCTGCCCTCAAC GCCGTCGAGCGGGCGAGCGCCGAAGCAATCACCCGCGCCAACCGGCGCATCTACGATGCCTTGGCCGAACCGCTGTCGGA CGCGCATCGCCGCCGCCTCGACGATCTGCTCAAGCGTCGGGACAACGGCAAAACGACCTGGCTGGCCTGGCTGCGCCAAT CGCCCGTCAAACCGAATTCGCGGCACATGCTGGAACACATCGAACGCCTCAAAGCGTGGCAGGCGCTCGACCTGCCTTCT GGCATCGAGCGGTCGGTGCACCAGAACCGCCTGCTCAAGATCGCCCGTGAGGGTGGCCAGATGACGCCCGCCGACCTGGC CAAGTTCGAGGCGCAGCGACGCTATGCCACCCTGGTGGCGCTTGCCATCGAGGGCATGGCCACCGTCACCGACGAAATCA TCGACCTGCACGACCGCATCCTGGGCAAGCTGTTCAACGCCGCCAAGAACAAGCATCAGCAGCAATTCCAGGCGTCCGGC AAGGCGATCAACGCCAAGGTGCGGCTGTTCGGCCGCATCGGCCAGGCGCTGATCGAGGCCAAGCAGGCGGGCCGCGATCC GTTCGCCGCCATCGAGGCCGTCATGTCCTGGGATGCCTTCGCCGAGAGCGTCACCGAAGCGCAGAAGCTTGCGCAGCCCG AGGACTTCGATTTCCTGCACCGCATCGGCGAAAGCTACGCCACGCTGCGCCGCTACGCGCCGGAATTCCTTGCCGTGCTC AAGCTGCGGGCCGCTCCCGCCGCGAAGGACGTGCTCGACGCCATCGAGGTGCTGCGCGGCATGAACAGCGACAACGCCCG CAAGGTGCCCGCCGACGCGCCGACCGAGTTCATCAAGCCGCGCTGGCAGAAGCTGGTCATGACCGACACCGGCATCGACC GGCGCTACTACGAACTGTGCGCGCTGTCGGAGATGAAGAACGCGTTGCGTTCCGGCGACATCTGGGTGCAGGGGTCGCGC CAGTTCAAGGACTTCGAGGACTACCTGGTGCCGCCCGCGAAATTCGCCAGCCTCAAGCAGGCCAGCGAATTGCCGCTGGC CGTGGCCACCGACTGCAACCGGTACCTGAACGACCGGCTGACGCTGCTGGAAACACAGCTTGCCACCGTCAACCGTATGG CGACGGCCAACGAGCTGCCGGACGCCATCATCACCGAGTCAGGCTTGAAGATCACGCCGCTCGACGCGGCGGTACCCGAC ACCGCCCAAGCGCTGATCGACCAGACGGCAATGATCCTGCCGCACGTCAAGATCACCGAACTGCTGCTGGAGGTGGACGA ATGGACGGGCTTCACTCGGCATTTCGCGCATCTGAAATCGGGCGACCCGGCCAAAGACAAGAACCTGTTGCTGACCACGA TCCTCGCCGACGCGATCAACCTGGGCCTGACCAAGATGGCGGAGTCTTGCCCCGGCACGACCTACGCCAAGCTGGCTTGG CTGCAAGCCTGGCACATCCGCGACGAAACCTACGGGGCGGCGCTGGCCGATCTGGTCAACGCACAGTTCCGCCATCCCTT CGCCGAGCACTGGGGCGACGGCACCACCTCATCGTCGGACGGCCAGAACTTCCGCACCGGCAGCAAGGCCGAGAGCACCG GCCACATCAACCCGAAATACGGGAGCAGCCCAGGGCGGACGTTCTACACCCACATTTCTGACCAGTACGCGCCATTTCAC ACCAAGGTCGTGAACGTCGGCGTGCGCGATTCGACCTACGTGCTCGACGGCCTGCTGTACCACGAGTCCGACTTGCGGAT CGAGGAGCATTACACCGACACGGCGGGCTTCACCGATCACGTCTTCGCCCTGATGCACCTCCTGGGCTTCCGCTTCGCGC CGCGCATCCGCGACCTGGGCGACACCAAGCTCTACATCCCGAAGGGCGACGCCGCCTATGACGCGCTGAAACCCATGATC GGCGGCACGCTCAACATCAAGCACGTCCGCGCCCATTGGGACGAAATCCTGCGGCTGGCCACCTCGATCAAGCAGGGCAC GGTGACGGCCTCCCTGATGCTCCGAAAGCTCGGCAGCTACCCACGCCAGAACGGCCTGGCCGTGGCGCTCCGCGAGCTGG GCCGCATCGAGCGCACGCTGTTCATCCTGGACTGGCTGCAAAGCGTGGAACTGCGCCGCCGCGTGCATGCCGGCCTGAAC AAGGGCGAGGCGCGCAATGCGCTGGCCAGGGCAGTGTTTTTCAACCGCCTGGGTGAAATCCGCGACCGCAGTTTCGAGCA GCAGCGCTACCGGGCTAGCGGCCTCAATCTGGTAACGGCTGCCGTCGTGTTGTGGAACACGGTCTATCTGGAACGGGCTG CGCACGCGCTGCGTGGCAACGGCCATGCCGTTGATGACGCGCTGTTGCAGTACCTGTCGCCGCTCGGTTGGGAGCACATC AACCTCACCGGCGATTACCTCTGGCGCAGCAGCGCCAAGATCGGCGCGGGCAAGTTCAGGCCGCTACGACCGCTGCAACC GGCTTAG Protein sequence : MPRRSILSAAERESLLALPDTKDELIRHYTFSETDLSIIRQRRGPANRLGFAVQLCYLRFPGVILGVDEPPFPPLLKLVA DQLKVSVESWDEYGQREQTRREHLVELQTVFGFQPFTMGHYRQAVQLLTEMALQTDKGIVLASTLIEHLRQQSVILPALN AVERASAEAITRANRRIYDALAEPLSDAHRRRLDDLLKRRDNGKTTWLAWLRQSPVKPNSRHMLEHIERLKAWQALDLPS GIERSVHQNRLLKIAREGGQMTPADLAKFEAQRRYATLVALAIEGMATVTDEIIDLHDRILGKLFNAAKNKHQQQFQASG KAINAKVRLFGRIGQALIEAKQAGRDPFAAIEAVMSWDAFAESVTEAQKLAQPEDFDFLHRIGESYATLRRYAPEFLAVL KLRAAPAAKDVLDAIEVLRGMNSDNARKVPADAPTEFIKPRWQKLVMTDTGIDRRYYELCALSEMKNALRSGDIWVQGSR QFKDFEDYLVPPAKFASLKQASELPLAVATDCNRYLNDRLTLLETQLATVNRMATANELPDAIITESGLKITPLDAAVPD TAQALIDQTAMILPHVKITELLLEVDEWTGFTRHFAHLKSGDPAKDKNLLLTTILADAINLGLTKMAESCPGTTYAKLAW LQAWHIRDETYGAALADLVNAQFRHPFAEHWGDGTTSSSDGQNFRTGSKAESTGHINPKYGSSPGRTFYTHISDQYAPFH TKVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGDTKLYIPKGDAAYDALKPMI GGTLNIKHVRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLN KGEARNALARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAVVLWNTVYLERAAHALRGNGHAVDDALLQYLSPLGWEHI NLTGDYLWRSSAKIGAGKFRPLRPLQPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EC042_4089 | YP_006098372.1 | transposase | Not tested | Tn2411 | Protein | 0.0 | 95 |
| tnpA | AAL08440.1 | transposase TnpA | Not tested | SRL | Protein | 0.0 | 93 |
| tnpA | ACF06153.1 | transposase | Not tested | Tn5036-like | Protein | 0.0 | 88 |
| tnpA | ACY75538.1 | TnpA | Not tested | Tn6060 | Protein | 0.0 | 73 |
| EXA24 | ABD94633.1 | truncated Tn1721 tranposase | Not tested | ExoU island A | Protein | 0.0 | 73 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CtCNB1_2516 | YP_003278558.1 | transposase Tn3 | VFG1031 | Protein | 0.0 | 93 |
