Gene Information

Name : CtCNB1_2485 (CtCNB1_2485)
Accession : YP_003278527.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 2848469 - 2848915 bp
Length : 447 bp
Strand : +
Note : COG0789, SoxR, Predicted transcriptional regulators

DNA sequence : 
ATGAAGATTGGTGAACTGGCTGAGGTCGCTGGTACGGCGGTTGAGACCATTCACTTTTATGAACGCGAGAAACTGCTGCC
TTCGGCTGCTACAGCTGAAAACAACTACCGTGTTTACTCGACGGACCACATAGACCAACTTGCCTTCATTCGATGCTGCC
GATCGCTGAATATGACACTTGATGAAGTACGTTCTTTGCTCTCGCTACGGGAGTCATCTGCGAAGGACTGTGCAGAGGTC
AATGCGCTCTTGCACACACACATAGAACATGTCAATCATCGCATCCAGGATCTGAGTGTTCTCGTTGCTGAACTTCAGAC
GATTCGTGCAAGCTACAGAGCTTCACAGGCACTTTCTGAATGCGGAGTTCTTTCTAGGCTGATGTCAGGTTCCACGACAA
GCTGCGGGTCTCCTCGTCCCCAGCGCCATATCTACGGCGCGCACTAG

Protein sequence : 
MKIGELAEVAGTAVETIHFYEREKLLPSAATAENNYRVYSTDHIDQLAFIRCCRSLNMTLDEVRSLLSLRESSAKDCAEV
NALLHTHIEHVNHRIQDLSVLVAELQTIRASYRASQALSECGVLSRLMSGSTTSCGSPRPQRHIYGAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 4e-20 45
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-23 42
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-23 42
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-23 42
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 1e-23 42
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 1e-23 42
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 1e-23 42
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_2485 YP_003278527.1 MerR family transcriptional regulator BAC0301 Protein 4e-20 51
CtCNB1_2485 YP_003278527.1 MerR family transcriptional regulator BAC0058 Protein 3e-24 50