Gene Information

Name : CtCNB1_2459 (CtCNB1_2459)
Accession : YP_003278501.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Unknown
Product : IstA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 2817228 - 2818754 bp
Length : 1527 bp
Strand : -
Note : COG4584, transposase and inactivated derivatives

DNA sequence :
GTGATTGACGTGGCCACTTTGAGTGTCATCCGGCGCTGGGCTCTGCGTGAGCACCTGTCCATCCGAGAGATCGCCCGCAG
AACTGGGCTTTCTCGCAATACCATCCGCAAGTATTTGCGCTCCGACGTTGTGCAACCTCAACTTGCACAGCGCACCATCG
CCACCAAGCTCGACCCCTTCGCCAGCAAGCTGTCAGGCTGGCTGCGTACAGAAGTCAACCGCTCTCGCAAGCAGCGGCGC
ACGATCAAGCAGATGTTTCTGGACTTGCAGGCGTTGGGCTACACCGGCTCATACAACCGAGTCGCTGCCTTTGCCAGAGT
ATGGAAGGCTCAGTGTCATGCGGCGGAGCAGACATCAGGGCGAGGCGTTTTTGTGCCCCTGGTCTTCGGCGCTGGAGAAG
CCTTCCAGTTTGATTGGAGCGAGGATTGGGCTGTCATCGCGGGTGTACGCACCAAGCTGCAAGTGGCTCACTTCAAGCTC
AGCCACAGCCGAGCCTTCTATCTGCGGGCCTATCCCCTGCAAACCCATGAGATGCTGTTCGATGCTCACAACCGTGCCTT
TGCGGTGTTTGGAGGCGTCCCTAGGCGGGGGATCTACGACAACATGCGCACAGCCGTCGATCGTGTCGGCCGTGGCAAGC
TCAGAGAGGTCAACGCCCGCTTCAGTGCTATGGCCAGCCATTTCCTGTTCGAGGCACAGTTTTGCAATCCGGCCTCGGGA
TGGGAGAAGGGACAGGTCGAGAAGAATGTTCGGGACGCTCGCCATCGTATCTGGCAATCTGTACCAACGTTTCCAACACT
CAGAGCCCTCAACGATTGGCTAGAGCAACGGTGTCAACAGTTATGGCAAGAGATTGCGCATGGCCAATTGCCTGGCTCAC
TTGCTGATGTGTGGGAGCAAGAACGCTCAACCTTGATGCCCATGCCTCGACCGTTTGACGGCTTTGTCGAGCATGCCAAA
CGAGTCTCTCCCACCTGCCTAGTTCACTTCGAGCGCAATCGCTACAGCGTGCCGGCCTCTTATGCCAACAGGCCCGTGAG
CTTGCAGGTTTATGCCGACCGCCTGGTTGTCGTGGCCGAAGGTCAGTTCGTCTGTGAACACCCGCGCATCATTGAGCGCA
ATCACCAAGGTTCTGGGCGTACGGTCTATGACTGGCGCCATTACCTGGCCGTATTGCAGCGCAAGCCTGGCGCATTGCGC
AACGGTGCGCCGTTTGCCGAGTTGCCAGACGCATTCAAACGACTGCAAGCTTTGCTCCTGAAGCAACCTGGCGGCGATCG
CGAGATGGTGGAAGTTCTTGCCTTGGTGTTGCAGCACGATGAGCAAGCCGTCCTGGCCGCTGTCGAGTTGGCACTGGAGG
ATGGCGTACCTCGCAAGACCCACATCATCAATATCTTGCACCGCCTCATTGATGGAACACCGGAACCTGAGCCCATCCAT
TCACCCCAAGCCTTGGCCTTGATCGTTGAGCCACAAGCCAACGTCGTGCGCTATGACCAACTCCGACAGGTGCGCCATGC
GTCATGA

Protein sequence :
MIDVATLSVIRRWALREHLSIREIARRTGLSRNTIRKYLRSDVVQPQLAQRTIATKLDPFASKLSGWLRTEVNRSRKQRR
TIKQMFLDLQALGYTGSYNRVAAFARVWKAQCHAAEQTSGRGVFVPLVFGAGEAFQFDWSEDWAVIAGVRTKLQVAHFKL
SHSRAFYLRAYPLQTHEMLFDAHNRAFAVFGGVPRRGIYDNMRTAVDRVGRGKLREVNARFSAMASHFLFEAQFCNPASG
WEKGQVEKNVRDARHRIWQSVPTFPTLRALNDWLEQRCQQLWQEIAHGQLPGSLADVWEQERSTLMPMPRPFDGFVEHAK
RVSPTCLVHFERNRYSVPASYANRPVSLQVYADRLVVVAEGQFVCEHPRIIERNHQGSGRTVYDWRHYLAVLQRKPGALR
NGAPFAELPDAFKRLQALLLKQPGGDREMVEVLALVLQHDEQAVLAAVELALEDGVPRKTHIINILHRLIDGTPEPEPIH
SPQALALIVEPQANVVRYDQLRQVRHAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4098 YP_006098381.1 transposase Not tested Tn2411 Protein 6e-153 63
unnamed AAN85144.1 unknown Not tested Hrp PAI Protein 3e-108 49
istA AAN62228.1 putative transposase Not tested PAGI-3(SG) Protein 5e-95 46