|
Name : CtCNB1_2403 (CtCNB1_2403) Accession : YP_003278445.1 Strain : Comamonas testosteroni CNB-1 Genome accession: NC_013446 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 2745543 - 2746016 bp Length : 474 bp Strand : - Note : COG0691, SmpB, tmRNA-binding protein DNA sequence : ATGGCCAAGAAACCAGAAACATCGTCGCGCATTGCCGACAATAAAAAAGCAGCTTTCAACTATTTCTTCGAGGAGCGCCA CGAAGCCGGCATGGTGCTGCACGGCTGGGAGGTCAAGGCCCTGCGCAGCGGCAAAGTGCAGCTCACCGATGGCTATGTGC TGATCAAGGACGGCGAGCTGTTCCTGCTGGGCTGCCAGATCAACCCGCTCAAGACGGCTTCAACCCACGTCAATCCCGAC TCGGCACGTATCAAGAAGCTGCTCTTGAAAAAGGACGAGATCAAGCGCCTCGTCGGCAAGGTCGAGCAAAAGGGCTATAC CCTGGTGCCCATCAATCTGCACTGGAAGAACGGATACGTGAAATGCGAGATCGCCCTGGCCAAGGGCAAGGCCGAGCATG ACAAGCGCGACGTGATCAAGGACCGCGAAGGCAAGCGCGAGGTGGAGCGCGCCATGAAAAACCGCAACCGTTGA Protein sequence : MAKKPETSSRIADNKKAAFNYFFEERHEAGMVLHGWEVKALRSGKVQLTDGYVLIKDGELFLLGCQINPLKTASTHVNPD SARIKKLLLKKDEIKRLVGKVEQKGYTLVPINLHWKNGYVKCEIALAKGKAEHDKRDVIKDREGKREVERAMKNRNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 1e-27 | 48 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 5e-16 | 44 |
