Gene Information

Name : CtCNB1_2234 (CtCNB1_2234)
Accession : YP_003278276.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Virulence
Product : tetrathionate reductase subunitA
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0243
EC number : -
Position : 2548683 - 2551874 bp
Length : 3192 bp
Strand : -
Note : COG0243, BisC, Anaerobic dehydrogenases

DNA sequence :
ATGAATGACAAGAAACTCTCCCCTGAACAATCACAAGACGTCGAGGCCGATCGCACCGATGCCAGCCGCCGCCGCATGCT
GCTGCGCGGCGGTGCCGTCGCAGGCGGTCTGGCAGCTTTTGCTGCAGGCTATGGCGAAACCGTGGCCAAGGGAGCCAAGG
GGCTGATCACCGGCAGCTCGGGCAAAGCCACCCAGAGCGCCACGCGCGGCAACTCGCTGACGCCCGAATTCCGCATCGAC
CCCGTCAGCGGCAAACTGACGACCCAGCCCGGCCAGGTGGTCAGCCCCTCCTCGTGTCTGGGCTGCTGGACGCAGTGCGG
CGTGCGTGTGCGCGTCGATACTGCCGACAACCGGATCATCCGTATCGCCGGCAACCCTTATCACCCGCTGGCCACCACCC
ACCCTGCGCCCATGGAAACACCGGTTCGCGAGGTCTATGCCATGCTGGGCGGTGACAACGGACTGGAAGGACGCGCCACC
AGTTGCGCCCGTGGATCAGCCATGCTCGAGCACCAAAAAGCACCGCACCGCGTTCTCAAGCCGCTCAAGCGCGTTGGTCC
ACGCGGCTCCGGCCAGTGGAAGAGCATCACGCTCGAAGAGCTGGTTCAGGAAATCTGCGAAGGCGGCGATCTCTTCGGCG
AAGGCCATGTGGATGGCCTGCGCGCCATCCGCGACGTCAACACGTTGATCGATGAAGCCAATCCCGAATACGGCCCAAAG
TCCAACCAATTGCTGGTGACGGAGGCCGCCAACGAAGGCCGTACTCCGCTGGTCAACCGCTTTGCCAAACAATCGTTCGG
CACCATCAACGTGTCCAACCACGGCTCTTACTGCGGCCAGACCTACCGGGTAGGCACGGGCGCGGCGCTGGGCGATATGG
CCGGCATGCCCCACGGCAAGCCGGACTGGAAGAGCTCGCGATTTGGCCTGTTCATCGGCACCTCGCCGGCCCAGTCCGGC
AATCCGTTCCAGCGCGTGGGCCGCGAGCTGGCCGAAGCCCGCTCGCGCGGCGAGAACACCTATCGATACGTGGTGGTCTC
GCCCATGCTGCCCACATCGTCCAGTCATGCGGCAGGTGACAACAACCGCTGGCTGCCCGTCAAACCCGGCAGCGACTTGG
CACTGGCCATGGGCCTGATCCGCTGGATCATCGACAACGAACGCTATGACAAGCAGTTTCTGACCCAGCCCGGCCCCGCC
GCCATGGCTAGCGTTGGCGAAGCCAGCTGGAGCAACGCCACCCACTTGCTGGTCAACGAGCCCAGGCATCCGCGCTACGG
CCAGTTCCTGCGCGGCGCAGATATTGGTCTGCCCATGCCAGATCCTATCGACGAAAAAACACCCGCCGAAGATGTGTATG
TGGTGCAGCTGAACGATGGCAGCCTGGCCGCCCATACCGTGGCCCAGCCTGCCGAGCTGGTGGCCGAGCGCGAATTCACA
CCCATCAAGGCTGCCGACGCCACCGAAGAGCCTGTGCCTATCGCCGTCTGCACCGCCTTTGTCAAGCTGCGCGCCGAAGC
GCACAGGAAGACGCTGGAGGAATACGCAGCTATGTGCGGCGTGCCCGTCAAGGAGATCGAGGAGTTGGCGCGCGAATTCA
CCAGCCATGGCAAACAGGCCGTGGCCAACTCGCACGGCGGCACCATGAATGGCTCGGGCTTTTACACCGCCTATGCCATT
GCCATGCTCAACAACCTCATCGGCAACCTCAATGTGCGCGGCGGCTGGGTCATGGATGCCGGCCCGTTCGGCCCCTTTGG
CCCGGGACCGCGATACAACTTTGCGCAATTTGAAGGCGCAGTCAAACCCCGGGGCGTGGCCCTGTCGCGCACCCGCTTCC
CTTACGAAAAGACCAGCGAATTCAAGCGCAAAAAGGAAGCGGGCCAGAACCCCTACCCCGCCAAGGCGCCCTGGTATCCC
GCGCCTGGCGGCCTTTCCAGCGAGATGCTGGCCGCCGGCATGCTGGGCTACCCCTACCCGGTCAAGGCCTGGATCAACCA
CATCAGCAACCCCATCTACGCCATGTGCGGCTTCGAGAATGCGCTGGCAGACTCGGTCAAGGACGTGAAAAAGCTACCGC
TGTTTGTCTCGGTGGACCCCTTCATCAACGAGACCTCTGCTCTGGCCGACTACATCGTGCCAGACACCGTCACCTATGAG
AGCTGGGGCATTGGCGCGCCCTGGGCCGACGTCGTAGCCAAGAGCAGCACAGTGCGCTGGCCCACGGTAGAAGCCGCCAC
GGCCAAAACGGCAGACGGCCAGGCCATCAGCTTCGAGACCTTCATCTTTGCCGTGGCCAAGCAATTGGGTCTGCCAGGTT
TTGGCAAGAATGCGATGAGCACCAAGCAAGGCGAGCTGCTGGACCTGGAAAACGCCGAAGACTTCTACCTGCGCGGCATG
TGCAATATCGCCTATCAGGCGGGCAAGCCTGTACCCGAAGCCAGCGACGACGACATAAAAATCACCGGCCTCGAGAAATG
GATGCCATCGTTGGAACAGCGTGTCACCCCCGAAGAAGTGCGCCGCGTCGCCATGGTCATGAGCCGTGGCGGCCGCTTCG
ACAAGGTTGAAGACGCATGGACGGACGACCAGCTCAAGCTGCAGGCCAAGTTCCCGGCCACTTTCTGGCACGAAGGTCTG
TCCAGGATGCGCCACTCCATGACCGGCGAACGCTACAGCGGCTGCCCCACCTGGTACCCCACGCGCCTGGCCGACGGCTC
GGACATGCGCCAAGTGTTTTCCGAACAAGACTGGCCGCTGACCATGACCAGCTACAAGTCCAACTTGATGAGCAGCATGT
CCATCGCCGCCTCACGCCTGCGCCAGGTGCACCCGCACAATCCCGTGAGCATCAACAAGGCCGACGCGGCAAAACTGGGC
ATCGCCAATGGCGACCACATCGAACTCAGCACCCCCGGCGGCAAACTCCAAGGCGTGGCCCTGGTACGCGCTGGTATCGC
GCCCGGTGCGATCGCCATTGAGCACGGCTACGGTCACAAGCAACTGGGCACCGTGGCCCACAAGGTTGACGGCCAGCCCA
CCCATGCCAACCCACAGCACGGCAATGGCGTGAATCTCAATGCTCTGGGCTTTGTCGATCCGACCCGACCTGCCAAGGAC
AATGTCTGGATCGACTGGGTATCGGGGGCAGTGGTCAGGCAAGGGCTGCCAGTGAGAGTGAGAAAGGCTTGA

Protein sequence :
MNDKKLSPEQSQDVEADRTDASRRRMLLRGGAVAGGLAAFAAGYGETVAKGAKGLITGSSGKATQSATRGNSLTPEFRID
PVSGKLTTQPGQVVSPSSCLGCWTQCGVRVRVDTADNRIIRIAGNPYHPLATTHPAPMETPVREVYAMLGGDNGLEGRAT
SCARGSAMLEHQKAPHRVLKPLKRVGPRGSGQWKSITLEELVQEICEGGDLFGEGHVDGLRAIRDVNTLIDEANPEYGPK
SNQLLVTEAANEGRTPLVNRFAKQSFGTINVSNHGSYCGQTYRVGTGAALGDMAGMPHGKPDWKSSRFGLFIGTSPAQSG
NPFQRVGRELAEARSRGENTYRYVVVSPMLPTSSSHAAGDNNRWLPVKPGSDLALAMGLIRWIIDNERYDKQFLTQPGPA
AMASVGEASWSNATHLLVNEPRHPRYGQFLRGADIGLPMPDPIDEKTPAEDVYVVQLNDGSLAAHTVAQPAELVAEREFT
PIKAADATEEPVPIAVCTAFVKLRAEAHRKTLEEYAAMCGVPVKEIEELAREFTSHGKQAVANSHGGTMNGSGFYTAYAI
AMLNNLIGNLNVRGGWVMDAGPFGPFGPGPRYNFAQFEGAVKPRGVALSRTRFPYEKTSEFKRKKEAGQNPYPAKAPWYP
APGGLSSEMLAAGMLGYPYPVKAWINHISNPIYAMCGFENALADSVKDVKKLPLFVSVDPFINETSALADYIVPDTVTYE
SWGIGAPWADVVAKSSTVRWPTVEAATAKTADGQAISFETFIFAVAKQLGLPGFGKNAMSTKQGELLDLENAEDFYLRGM
CNIAYQAGKPVPEASDDDIKITGLEKWMPSLEQRVTPEEVRRVAMVMSRGGRFDKVEDAWTDDQLKLQAKFPATFWHEGL
SRMRHSMTGERYSGCPTWYPTRLADGSDMRQVFSEQDWPLTMTSYKSNLMSSMSIAASRLRQVHPHNPVSINKADAAKLG
IANGDHIELSTPGGKLQGVALVRAGIAPGAIAIEHGYGHKQLGTVAHKVDGQPTHANPQHGNGVNLNALGFVDPTRPAKD
NVWIDWVSGAVVRQGLPVRVRKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrA NP_456144.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 47
ttrA NP_805054.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 47
ttrA YP_216391.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 47
ttrA NP_460348.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 47
ttrA CAB37416.1 tetrathionate reductase subunit A (TtrA) Virulence SPI-2 Protein 0.0 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_2234 YP_003278276.1 tetrathionate reductase subunitA VFG0484 Protein 0.0 47