Gene Information

Name : CtCNB1_0022 (CtCNB1_0022)
Accession : YP_003276064.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 24843 - 25547 bp
Length : 705 bp
Strand : -
Note : COG0745, OmpR, Response regulators consisting of a CheY-likereceiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGTACCGCTACCTCATCATCGAAGACGATGCGCTCAACGCGCGTTACATCGCTGAAGGGTTGCGCCAGCAAGGCGCGCA
TGTCAGCGTCTGCGGTGACGGCGTGCAAGGCATTGCACAGGCCGTTGGCGAGAACTGGGATGTCATCATCCTCGACCGCA
TGTTGCCCAATGGCTTTGACGGGCTGCAGATTCTGCAGACACTGCGCTCCATGGGAAAACAGACGCCGGTGCTGGTGCTC
AGTGCCTTGTCCGCCACGGACGAGAGAGTGCGCGGGCTCAAGGCCGGCTGCGATGACTATCTGACCAAGCCCTTTGCATT
TTCCGAGCTATCGGCAAGGCTCGAAGCCCTGGTGCGCCGCGCCCAGATCCCGGCTCCCACGCGCGAGATGCAGGTGGCCG
ATCTGCGCGTCAACCTGATTTCGCGCAGCGCCGAGCGCGCCGGCCAGCCGCTGTCGCTGCAGCCGCGCGAGTTCCGCCTG
CTGGCGTTTCTCATGCAGCACGCGCACCAGATCGTCACGCGCACCATGCTGCTGGAGTCGGTCTGGGATTACCGCTTCGA
TCCGCAGACCAATGTGATCGACGTGCACATCAGCCGCCTGCGCAGCAAGGTGGACAAAGGCTTTGCCACGCCTCTCATCC
ATACCGTGCGCGGTGTGGGCTACAGCCTTTCGGACCAGCCGCAAGACCTGCCCGAGGTGGTCTGA

Protein sequence : 
MYRYLIIEDDALNARYIAEGLRQQGAHVSVCGDGVQGIAQAVGENWDVIILDRMLPNGFDGLQILQTLRSMGKQTPVLVL
SALSATDERVRGLKAGCDDYLTKPFAFSELSARLEALVRRAQIPAPTREMQVADLRVNLISRSAERAGQPLSLQPREFRL
LAFLMQHAHQIVTRTMLLESVWDYRFDPQTNVIDVHISRLRSKVDKGFATPLIHTVRGVGYSLSDQPQDLPEVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-37 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-36 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_0022 YP_003276064.1 two component transcriptional regulator BAC0197 Protein 2e-40 44
CtCNB1_0022 YP_003276064.1 two component transcriptional regulator BAC0347 Protein 1e-43 44
CtCNB1_0022 YP_003276064.1 two component transcriptional regulator BAC0111 Protein 1e-47 44
CtCNB1_0022 YP_003276064.1 two component transcriptional regulator BAC0125 Protein 1e-39 43
CtCNB1_0022 YP_003276064.1 two component transcriptional regulator BAC0308 Protein 1e-42 43
CtCNB1_0022 YP_003276064.1 two component transcriptional regulator BAC0083 Protein 2e-45 42
CtCNB1_0022 YP_003276064.1 two component transcriptional regulator BAC0638 Protein 8e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CtCNB1_0022 YP_003276064.1 two component transcriptional regulator VFG1389 Protein 3e-35 44
CtCNB1_0022 YP_003276064.1 two component transcriptional regulator VFG0596 Protein 3e-37 43