Gene Information

Name : CtCNB1_1952 (CtCNB1_1952)
Accession : YP_003277994.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Unknown
Product : MetQ protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1464
EC number : -
Position : 2209635 - 2210420 bp
Length : 786 bp
Strand : -
Note : COG1464, NlpA, ABC-type metal ion transporter

DNA sequence :
ATGTTGAAGAAAGCTCTCTCTGCTATCGCTATTGCCACTCTGGCGCTGTCGGCCCAGGCTGCTGACGTGCTCAAGGTGGG
CGCCACGGCCGTTCCTCACGCCGAAATCCTCAATCACATCAAGCCCGCACTGAAGGCTCAGGGCATCGATCTGGAAATCA
AGGAGTTCAGCGACTACGTGCAGCCCAATGCTGCCGTGGAAGACAAGCAGCTGGATGCCAACTTCTTCCAGCACCAGCCC
TATCTGGACAGCTACAACAAGGACCGCAAGACCTCGCTGGTGGCCGTACCCAACGGCAAGGTTCATGTGGAGCCCTTCGG
TGCCTACTCCAGCAAGATCAAGAACATCAAGGATCTGAAGAATGGCGCTACCGTGGCCATTCCCAACGACCCCTCCAACG
GCGGCCGTGCACTGATTCTGCTGGCCAAGCATGGTCTGATCGAGCTCAAGGATCCCAAGAGCCTGACCCCCACTGCTCTG
GACGTCGTCAAGAACCCCAAGAAGCTGAAGTTCAAGGAACTGGAAGCGCCTTTGCTGCCCCGCGCACTGGCTGATGTCGA
CCTGGCCCTGATCAACACCAACTACGCAATCGAAGCCAAGCTCAACCCCACCAAGGATGCCCTGTTCATCGAAGGTGCCG
ATTCGCCCTACACCAATATCGTGGTGGCCCGCAAGGATCGCGCCAACGGCGCCGACATTGCCAAGCTGATGAGCGCTCTG
CACTCTGCAGACACCAAGAAGTTTATTCAGGAAAAGTACAAGGGCGCCGTGGTTCCCGCGTTCTGA

Protein sequence :
MLKKALSAIAIATLALSAQAADVLKVGATAVPHAEILNHIKPALKAQGIDLEIKEFSDYVQPNAAVEDKQLDANFFQHQP
YLDSYNKDRKTSLVAVPNGKVHVEPFGAYSSKIKNIKDLKNGATVAIPNDPSNGGRALILLAKHGLIELKDPKSLTPTAL
DVVKNPKKLKFKELEAPLLPRALADVDLALINTNYAIEAKLNPTKDALFIEGADSPYTNIVVARKDRANGADIAKLMSAL
HSADTKKFIQEKYKGAVVPAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nlpA AAW51766.1 NlpA Not tested AGI-3 Protein 5e-36 43
SAAV_0786 YP_003281709.1 ABC transporter substrate-binding protein Not tested SaPIAv Protein 2e-37 41