|
Name : CtCNB1_1263 (CtCNB1_1263) Accession : YP_003277305.1 Strain : Comamonas testosteroni CNB-1 Genome accession: NC_013446 Putative virulence/resistance : Unknown Product : sigma54 specific transcriptional regulator, Fis Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 1424831 - 1426822 bp Length : 1992 bp Strand : + Note : COG3829, RocR, transcriptional regulator containing PAS DNA sequence : ATGTCGAACGATGGTGCCAAACGGATGCCGGCAGCCGGCCAGCCGCATTTGCCCCACATCGTCACCGTAGGCCGCTACCG TGTGGGGCGGGTGCTGGAGCGGCTGGCACAGCCCTGGTCGGGTGAGGCCAGGTTCTCGCACATCTCGGCCTCCTTCGATG ATGCGGTGGCCCAGGTGCAGGCGCTCAATCTGCGCCAGCCCATCGATGCCCTGGTGGGGGCGGGGGCCAGTGGTGCCTGG ATTCGAGAACGCGTGGACATTCCAATGGCCATGGTAGAAGTGCGTGGCCTGGATTTGCTGCAGGCGCTGCGCCAGGCCAA GTTGCAGGCCACGGAAGAAGCTCCGCGCGTTGGCCTGGTCAACTTCGAGGTGCCGTCGCCCGTGGTGGCACAGTTCGACA GCCTGTTCGGCCTGGGCCTGGTCCAGATTGCCTATCAAGGTCCGCATGACGCGCCGGCCTGTGTGCAAAAGCTCAAGGCG GAAGGCGTTGGTGCCGTGGTGGCGCCGGGCTTGGTGGCCGATCTGGCAGAGCAGGCGGGCATGGCCAGCGTGTTGCTGTA TTCCGATATTTCGGTGCGTCAGGCACTCAGCGACGCCATGCTGCTGGCCCGTCATCGACGTGCCGAGCGCGACCGGCATC AACGGCTGGAAACCGTGTTGCATCAACTGCAGGATGGTGTGGCTGCCGTGGACGAGCGTGGCCGTATTTGCGCGCTGAAC CCACGAATGGCCGCCTTGCTCGGGACCCCGGTCGATGCCTTGCACGGCCGCATGCTGGAAGAGGTGGCTCCGGCCCTGGG CACGGCTCGGGCGCTCGCTGGCGAGGAGGGCGGAGAAGAGGTGGTGCAACTGGCCCTGCGTACCCTGGTGGTGCGACGTG CGCCAATTGTGGAAAACGGGCTGGTGACCGGCGCTTTGCTGGTCTGCCGCGATCCAGCCGTCATTCAGCGGGCCGATCGC AGCCTGCGCGCCAATCAGCGGCAAAGAGCCGCCGGTGTACGCTGGCGCATTGAGGACTATCTGGGCAGCAGCCCCGCTGC CCAGCGCGTGCGACTGCTGGCCAGGCAGTACGCGAACAGCGATGCGACGGTGCTCATCCTGGGAGAAAGCGGGACCGGCA AGGAGCTGGTGGCGCAAGGCATTCACAGCGCGGGACGGCGTGCGGAGCAGCCATTTCTGGCCGTCAACTGTGCGGCGCTC AGTGAAAGCCTGCTGGAGAGCGAGCTTTTCGGTTACGAGGAAGGCGCTTTTACCGGGGCCAGGCGCGGCGGCAAGACCGG GCTGGTCGAGGCAGCGCATACCGGGACCCTGTTTCTCGATGAAATTGGCGACATGCCGCTGGCACTGCAATCGCGGCTGC TGCGCGTGCTGCAGGAGCGCGAGGTATTGCGCGTAGGTTCCACCACGCCGATTCCCGTGGATGTGCGCGTGATTGCCGCC ACCCATGCGGATCTGGCGGATCAGGTGGAGCGTGGCCGGTTCCGGCGCGATCTCTACTACCGGCTGGCGGTGCTGCGCCT GAGCACGCCTTCGCTACAAATGCGAGGTGGTGCCGATGTTGCTGAACTGGGCCGCGCCATGCTGGCTCAGCGCCTGAACG CTGCAAGCGAGTTGCCCCGCGCACTGCATGACAGAGTGGAGCAGCAGCTCGATGCACTGCTGGCCAGGGCTGCGGTGCAT GACTGGCCCGGCAACGTCCGTGAACTGGACAACTGGGTGGAGCGCCTGCTGGCCTGCAGCGACTATCTGGACTCAGGCCG GGGTGGCCTTCTGGATATGGCGCGCTTGCTTGAAGTCTTCCCGGAGTGCGCCGACGGCCTGGCTCCGGCCGAGCCTGCCG CGGCTCGGCAGGCACAGCTCAGAGACGCGGGTCGCCTTGCCGAGCAGAAGCGATTGCGCGAAGTGCTGGAGTCGGTTGGA GGTGATCAGCGCCAGGCCTGTGAAATTCTCGGCATCAGCCGGGCCACTTTGTGGCGGCGCATGAAGGCTTAG Protein sequence : MSNDGAKRMPAAGQPHLPHIVTVGRYRVGRVLERLAQPWSGEARFSHISASFDDAVAQVQALNLRQPIDALVGAGASGAW IRERVDIPMAMVEVRGLDLLQALRQAKLQATEEAPRVGLVNFEVPSPVVAQFDSLFGLGLVQIAYQGPHDAPACVQKLKA EGVGAVVAPGLVADLAEQAGMASVLLYSDISVRQALSDAMLLARHRRAERDRHQRLETVLHQLQDGVAAVDERGRICALN PRMAALLGTPVDALHGRMLEEVAPALGTARALAGEEGGEEVVQLALRTLVVRRAPIVENGLVTGALLVCRDPAVIQRADR SLRANQRQRAAGVRWRIEDYLGSSPAAQRVRLLARQYANSDATVLILGESGTGKELVAQGIHSAGRRAEQPFLAVNCAAL SESLLESELFGYEEGAFTGARRGGKTGLVEAAHTGTLFLDEIGDMPLALQSRLLRVLQEREVLRVGSTTPIPVDVRVIAA THADLADQVERGRFRRDLYYRLAVLRLSTPSLQMRGGADVAELGRAMLAQRLNAASELPRALHDRVEQQLDALLARAAVH DWPGNVRELDNWVERLLACSDYLDSGRGGLLDMARLLEVFPECADGLAPAEPAAARQAQLRDAGRLAEQKRLREVLESVG GDQRQACEILGISRATLWRRMKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 8e-68 | 42 |
