Gene Information

Name : CtCNB1_1118 (CtCNB1_1118)
Accession : YP_003277160.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1252624 - 1253580 bp
Length : 957 bp
Strand : +
Note : COG4974, XerD, Site-specific recombinase XerD

DNA sequence :
ATGTCCGACGCCCCCAAAAAAGCCCGCGAGTCCCAGATTCCCGATGACTGGCCGCCGCCCTTGCCGCAGAGCCAGCATGC
GCTCGATCAGTTTATCGATGCCCTGCTGCTGGAGGACGGGCTTTCGCGCAATACCTTGTCCGCTTACCGGCGTGACCTGA
CGGCGACTGCGCGCTGGCTGGCGCGGCTGCAGCCGCCCAAGGCGCTGGATGCTGCGCTGGAAGGCGATCTGCAGGGCTAT
TTCACGGCCCGTGTGGAGGGCACCAAGGCCACCTCCTCGAACCGTAGGCTGACGGTGTTGCGTCGCTATTTTCACTGGGC
GCTGCGTGAAAAGCGCATCGCTGCCGACCCCACGGTGCGCATGCTGGCGGCCAAACAGCCGCCGCGCATGCCCAAGACCC
TGACCCAGGAGCAGGTGGAGGCCCTGCTCGATGCGCCCGATGTGGACAGCCCGCTGGGCTTGCGCGATCGCGCCATGCTG
GAGCTGATGTATGCCAGCGGTCTGCGCGTCAGCGAACTGGTGGGCGTGTGCATGCATGAGCTGGACCTGCGCTCGGGCGT
GCTGCGCGTGACGGGCAAGGGGCGCAAGGAGCGGCTGGTGCCGTTCGGCCAGGAGGCGCAGCACTGGCTGGAGCGCTATC
TGCAGCAGGCGCGTGCCGTGATTTTGGGGGGGCAGCAGACCGAGGAGGTGTTTGTGACCCAGCGCGGTGCGGGCATGAGC
CGCGTGATGTTCTGGGTCATCGTCAAGAAATGCGCGCAGATTGCAGGTGTGAACTCGCCGCTGTCGCCACATACGCTGCG
CCATGCGTTTGCCACCCATTTGCTCAACCATGGCGCCGACCTTCGCGTGGTGCAGATGCTGCTGGGGCATGCCGATATCT
CCACCACCACCATCTACACCCATGTGGCGCGTGAGCGGCTCAAGGCCCTGCATGCCGAGCATCACCCGCGCGGCTGA

Protein sequence :
MSDAPKKARESQIPDDWPPPLPQSQHALDQFIDALLLEDGLSRNTLSAYRRDLTATARWLARLQPPKALDAALEGDLQGY
FTARVEGTKATSSNRRLTVLRRYFHWALREKRIAADPTVRMLAAKQPPRMPKTLTQEQVEALLDAPDVDSPLGLRDRAML
ELMYASGLRVSELVGVCMHELDLRSGVLRVTGKGRKERLVPFGQEAQHWLERYLQQARAVILGGQQTEEVFVTQRGAGMS
RVMFWVIVKKCAQIAGVNSPLSPHTLRHAFATHLLNHGADLRVVQMLLGHADISTTTIYTHVARERLKALHAEHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 6e-57 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 6e-57 54