Gene Information

Name : CtCNB1_1048 (CtCNB1_1048)
Accession : YP_003277090.1
Strain : Comamonas testosteroni CNB-1
Genome accession: NC_013446
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : -
Position : 1178152 - 1179261 bp
Length : 1110 bp
Strand : -
Note : COG1985, RibD, Pyrimidine reductase

DNA sequence :
ATGACACCCTCTGCCCACTTCATGAACAAAGCGCTTGAGCAGGCTGCCCAGGCGCTTTTTCTTTCTTCACCCAACCCGCG
CGTTGGCTGCGTGATCGTCGATGCTTCGGAGCGCATCATCGGCCAGGGCTTTACCCAGCAGACCGGTGGCCCGCACGCCG
AGGTGATGGCTTTGCGCGATGCTGCAGCCAAAGGCAACGATGTGCGTGGAGCCACGGCCTATGTGACGCTGGAGCCCTGC
TCGCACCATGGCCGCACCGGCCCCTGCTGCGACGCCTTGATCGCAGCCGGCATCGGCAAGGTGGTGGGAGCACTGACGGA
TCCCAATCCGCAAGTGGCCGGCCAGGGTTTCGAGCGGCTGCGCGCTGCGGGTGTTGATGTGGAGATCGGCCCCGGCGGAG
CTGAATCACGCGAGCTCAATATCGGCTTTTTCAGCCGCATGATTCGCGGCATACCCTGGGTGCGCATGAAGGCAGCCAGC
TCGCTGGACGGCATCACGGCCTTGCACAATGGCCAAAGCCAGTGGATCACCTCGGCGGCCGCCCGGGCCGACGGACATGC
CTGGCGCGCCCGTGCCTGCACGATTCTGACCGGCATAGGCACGGTGCTTGAAGACAATCCGCGCATGAATGTGCGTGATG
TAGACACGCCACGCCAGCCACGCATTGCCGTGGTGGACAGCAAGCTGGACATCCCGCTGGACGCTCATGTTTTGAAAGCA
CCTAGCGGTTGCCTCATCTATACCTGCAGCACAAAGCAATCCAGAATTGAAGCACTGCAAGCGCTAGGCGCTACGGTTAT
TGATATGCCCAATGCTGCAGGCAAGGTGGATCTCGCGGCCATGCTGCGCGATCTGGCCCAGCGCGGCACGAATGAGCTGC
ATGTGGAAGCGGGCTTCAAGCTCAACGGCTCCCTGATTCGCGAAGGTCTGGTCGATGAGCTTCTCTTCTATCAAGCCCCG
AAACTGCTGGGCACGGGTGCCATGGGTATTGCCAACTTCGGCCCGCTCGACAGACTGGACCAAGGTCTGCCACTGGTGTT
CCATGATGTCGCCCGCCTGGGACCGGACCTGCGCATTGTTGCCAGAGTCCAGGGCCGAGAGCAGTTCTAG

Protein sequence :
MTPSAHFMNKALEQAAQALFLSSPNPRVGCVIVDASERIIGQGFTQQTGGPHAEVMALRDAAAKGNDVRGATAYVTLEPC
SHHGRTGPCCDALIAAGIGKVVGALTDPNPQVAGQGFERLRAAGVDVEIGPGGAESRELNIGFFSRMIRGIPWVRMKAAS
SLDGITALHNGQSQWITSAAARADGHAWRARACTILTGIGTVLEDNPRMNVRDVDTPRQPRIAVVDSKLDIPLDAHVLKA
PSGCLIYTCSTKQSRIEALQALGATVIDMPNAAGKVDLAAMLRDLAQRGTNELHVEAGFKLNGSLIREGLVDELLFYQAP
KLLGTGAMGIANFGPLDRLDQGLPLVFHDVARLGPDLRIVARVQGREQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-45 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-45 41