|
Name : Gbro_0862 (Gbro_0862) Accession : YP_003272068.1 Strain : Gordonia bronchialis DSM 43247 Genome accession: NC_013441 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 919556 - 922102 bp Length : 2547 bp Strand : + Note : PFAM: ATPase AAA; Clp ATPase-like; AAA ATPase central domain protein; UvrB/UvrC protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: hypothetical protein ; K03696 ATP-dependent Clp proteas DNA sequence : ATGTTCGAACGGTTCACCGACCGCGCGCGACGGGTTGTGGTTCTGGCCCAAGAAGAGGCGCGGATGCTCAACCACAACTA CATCGGAACCGAGCACATCCTCCTCGGCCTCATCCACGAGGGCGAGGGCGTGGCCGCCAAGGCGCTCGAATCACTCGGGA TCTCCCTGGAAGGCGTTCGCAGCCAGGTCGAGGAGATCATCGGCCAGGGGCAGCAGGCGCCGTCGGGACACATCCCGTTC ACGCCGCGCGCCAAGAAGGTCCTCGAGTTGTCGCTGCGTGAGGCCTTACAGCTCGGCCACAACTACATCGGCACCGAGCA CATCCTCCTCGGCCTCATCCGTGAGGGCGAGGGCGTGGCCGCGCAGGTCCTGGTGAAGCTGGGCGCTGACCTCAACCGGG TCCGCCAGCAGGTCATTCAGCTGCTGAGTGGCTACCAGGGCAAGGAGCCGCAGGAAGCCGGCACCGGCGGTCGCAGCAGC GAGTCCGGCACCCCGTCGACCTCGCTCGTGCTCGACCAGTTCGGCCGGAACCTGACCGCCGCCGCGGGCGAGGGCAAACT CGACCCCGTCATCGGCCGCGAGAAGGAAATCGAGCGGGTCATGCAGGTGCTGAGCCGCCGCACCAAGAACAACCCGGTGC TGATCGGCGAGCCCGGCGTCGGCAAGACCGCCGTCGTCGAGGGTCTCGCGCAGGCCATCGTCAACGGCCAGGTGCCCGAG ACGCTCAAGGACAAGCAGCTCTACACCCTCGACCTCGGGTCGCTGGTGGCGGGCAGCCGCTACCGCGGTGACTTCGAGGA GCGCCTGAAGAAGGTGCTCAAGGAGATCAACACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTCGTCG GCGCGGGTGCCGCCGAGGGCGCGATCGACGCGGCGTCCATCCTCAAGCCGAAGCTGGCTCGCGGTGAGCTGCAGACCATC GGTGCCACCACGCTCGACGAGTACCGCAAGTACATCGAGAAGGACGCCGCTCTCGAGCGCCGGTTCCAGCCGGTGCAGGT CGGCGAGCCGTCGGTGGAGCACACCATCGAGATCCTCAAGGGGCTGCGCGACCGCTACGAGAGCCACCACCGGGTGTCCA TTACCGACGGAGCCCTGGTGGCCGCGGCGACGCTGGCCGACCGCTACATCAACGACCGGTTCCTGCCGGACAAGGCGATC GACCTCATCGACGAGGCGGGCGCGCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGCG CATCGCTGATGCCCGCAAGGAGAAGGAGTCCGCGATCGACGCGCAGGACTTCGAGAAGGCCGCCAGCCTCCGGGACAAGG AGAAACAACTCGTCGCCGAGCGTGCCGAGCGTGAAAAGCAATGGCGCAGTGGCGATATGGACGTCGTGGCCGAGGTCGAC GACGAGCAGATCGCCGAGGTCCTGGGCAACTGGACCGGCATCCCGGTGTTCAAGCTCACCGAGGAGGAGACCACCCGTCT ACTCCGCATGGAGGACGAGCTGCACAAGCGGATCATCGGCCAGGAGGATGCGGTCAAGGCCGTCTCCAAGGCGATCCGCC GTACCCGCGCCGGACTCAAGGACCCCAAGCGTCCGTCGGGCTCGTTCATCTTCGCCGGCCCGTCCGGCGTCGGAAAGACC GAGCTCTCCAAGGCGCTGGCGAACTTCCTGTTCGGCGAGGACGACGCACTCATCCAGATCGACATGGGCGAGTTCCACGA CCGGTTCACCGCGTCGCGTCTGTTCGGTGCCCCTCCCGGTTACGTCGGCTACGAAGAGGGTGGCCAGCTGACCGAGAAGG TGCGGCGTAAGCCGTTCTCGGTGGTGCTGTTCGACGAGATCGAGAAGGCGCACTCGGAGATCTACAACACCCTGTTGCAG GTCCTCGAAGACGGTCGGCTCACCGACGGTCAGGGACGCACGGTCGACTTCAAGAACACCGTGCTGATCTTCACCTCGAA CCTCGGTACCTCCGACATCTCCAAGGCCGTCGGGCTGGGCTTCACCAAGGGCGACGATTCGCAGTCGAACTACGAGCGGA TGAAGCTCAAGGTCAACGACGAATTGAAGAAGCACTTCCGTCCCGAGTTCCTCAACCGCATCGACGACGTCATCGTGTTC CACCAGTTGACGCGCGACGAGATCATCCAGATGGTTGACCTGATGATCAACCGTGTCGAGACGCAGCTGAAGAACAAGGA CATGGCACTCGAGCTCACCGACCGGGCCAAGGCGTTGCTCGCCAAGCGCGGCTTCGACCCGGTGCTCGGTGCGCGTCCGC TGCGTCGCACGATCCAGCGTGAGATCGAGGATCAGCTCTCCGAGAAGATCCTGTTCAACGAGATCGGCGCCGGGCAGATC GTGCTGGTCGACGTCGAGGGCTGGGACGGCGAGGACGACGGTGAGGATGCCAAGTTCACCTTCACCGGCTCGGAGAAGCC ACGTGAGTTCCCCGATGCTCCCGTCGAGCTGACCAAGGCAGGAGAGGGCGGCAGCGAGTCGAGCTGA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKEPQEAGTGGRSS ESGTPSTSLVLDQFGRNLTAAAGEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGQVPE TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI GATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILKGLRDRYESHHRVSITDGALVAAATLADRYINDRFLPDKAI DLIDEAGARMRIRRMTAPPDLREFDERIADARKEKESAIDAQDFEKAASLRDKEKQLVAERAEREKQWRSGDMDVVAEVD DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT ELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHSEIYNTLLQ VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKAVGLGFTKGDDSQSNYERMKLKVNDELKKHFRPEFLNRIDDVIVF HQLTRDEIIQMVDLMINRVETQLKNKDMALELTDRAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFNEIGAGQI VLVDVEGWDGEDDGEDAKFTFTGSEKPREFPDAPVELTKAGEGGSESS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 81 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Gbro_0862 | YP_003272068.1 | ATPase AAA | VFG0079 | Protein | 0.0 | 61 |
| Gbro_0862 | YP_003272068.1 | ATPase AAA | VFG0080 | Protein | 1e-146 | 50 |
