Gene Information

Name : Gbro_0739 (Gbro_0739)
Accession : YP_003271949.1
Strain : Gordonia bronchialis DSM 43247
Genome accession: NC_013441
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 796408 - 796722 bp
Length : 315 bp
Strand : -
Note : PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein

DNA sequence :
ATGGCAGCACCTCGGAAGTACAGCATTGAGCTGAAGGAGCGAGCGACGCGGATGGCGGTGGAAGCCCGCAAGGACCCGGC
CACACGGCCGGGAGCGTTCAAACGGATCGGCGATCAACTCGGTGTGCACCCGGAGGCGCTACGCACCTGGGTCAAGCAAG
CCGAAATCGATGGCGGGCAGCGGCCGGGTACCACGAGCAGCGATTCCGAGCGGATCGCGCAGCTCGAGCGGGAGAACCGC
GAGCTGCGGCGGGCGAACACGATCTTGAAGCAGGCGTCGGCTTTTTTGGCTCTTCCTGATTCAGAGTGCGTGTAG

Protein sequence :
MAAPRKYSIELKERATRMAVEARKDPATRPGAFKRIGDQLGVHPEALRTWVKQAEIDGGQRPGTTSSDSERIAQLERENR
ELRRANTILKQASAFLALPDSECV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 5e-07 42
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 5e-07 42
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 5e-07 42
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 1e-04 42
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-05 42
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 4e-08 41
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 9e-08 41
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 9e-08 41
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 6e-08 41
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 2e-05 41
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 4e-08 41
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 4e-08 41
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 9e-08 41
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 4e-08 41
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 9e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbro_0739 YP_003271949.1 transposase IS3/IS911 family protein VFG1603 Protein 9e-06 41