|
Name : Gbro_0650 (Gbro_0650) Accession : YP_003271869.1 Strain : Gordonia bronchialis DSM 43247 Genome accession: NC_013441 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 710671 - 712377 bp Length : 1707 bp Strand : - Note : TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: tcx:Tcr_0148 thiamine biosynthesis protein ThiC DNA sequence : ATGGACACACGTGTATCTGCTGGTCGTCGTTCTGCCGGCGAAGACTTCACTGTCGACGCCGACATCCTCACCACCGGCCC CATCGAGGGAAGCCGTAAGCACTACCTCGAACTCGAGCACCTCCGCATCCCGCAGCGACGCATCCACCTCACCAACGGTG AGCATCTCGACGTCTACGACACGTCGGGCCCCTACACCGACGACGCCGCGGACATCGACGTCGAGCGCGGACTCCCACGA ATGCGGGACAGCTGGCAGCGACCCGAGCCGGTGGACGGGGCATCGACGCAACTCGCCTGGGCGCGGGCCGGCGTCGTCAC CGACGAGATGCGGTTCGTGGCCGCCCGCGAGAATGTCGACGTGGAGCTGGTGCGCTCCGAAGTCGCCGCCGGGCGCGCGG TCATCCCGGTCAATCACCGCCATCCCGAGTCCGAACCGATGATCATCGGCAAGGCGTTCGCGGTGAAGGTCAACGCCAAC ATCGGCAACTCGGCGGTGACCAGTTCCATCGCCGAGGAGGTGGAGAAAATGGTGTGGGCCACCCGGTGGGGTGCCGACAC CATCATGGATCTGTCCACCGGCAAAGACATCCACATGACCCGCGAATGGATCATGCGTAACTCGCCGGTGCCGGTGGGAA CCGTCCCGATCTATCAGGCGCTGGAGAAGGTCAACGGTGACCCGACGCGGCTCACCTGGGAGATCTACCGCGACACCGTG ATCGAGCAGGCCGAGCAGGGCGTCGACTACATGACCGTGCACGCCGGTGTGCTGCTGCGCTACGTTCCGCTCACCGCGCG CCGGGTCACCGGGATCGTGTCGCGCGGCGGTTCGATCATGGCAGCCTGGTGTCTGGCGCATCATCAGGAATCGTTCCTGT ACACCAACTTCGACGAGCTGTGCGAGATCTTCCGCCGCTACGACATCACCTTCTCCCTCGGCGACGGCCTGCGCCCGGGC TCCATCGCCGACGCCAACGACGAAGCCCAGTTCGCTGAACTCCGCACTCTGGGTGAGCTCACCACGATCGCCAAATCCTA TGGCGTGCAGGTGATGATCGAGGGGCCCGGTCACGTGCCGATGCACAAGATCGCCGAGAACGTCCGCCTCGAGGAGGAGT ACTGCGAGGAGGCGCCGTTCTACACCCTGGGCCCGCTGGCCACCGACATCGCACCGGCCTATGACCACATCACCTCGGCG ATCGGTGCGGCGATGATCGCGCAGGCCGGCACCGCGATGCTCTGTTACGTCACCCCCAAAGAGCATCTGGGACTTCCCAA TCGGGACGATGTGAAGGTCGGCGTGATCACCTACAAGATCGCCGCCCACTCCGCCGACCTATCCAAGGGCCACCCGCGCG CGCAGGAGCGCGACGACGCATTGTCCAAGGCGCGCTTCGAGTTCCGCTGGACCGACCAGTTCAACCTCGCACTCGACCCG GATACCGCGCGCGAATACCACGACGAGACGCTGCCCGCCGAGCCGGCCAAGACCGCCCACTTCTGCTCGATGTGCGGGCC CAAATTCTGCTCGATGCGGATCTCCGCGGACGTCCGCGCCTACGCCGAGGAGAACAACCTCGTCACCGCCGAGGACATCG ACCGCAAGATCGCCGAGGAGATGGCGGCGAAGTCGGCCGAGTTCGCGGAGTCGGGCAACCGGGTCTACCTTCCGCTCGAG ACTGCCGGGAGCACCACCGACCGATGA Protein sequence : MDTRVSAGRRSAGEDFTVDADILTTGPIEGSRKHYLELEHLRIPQRRIHLTNGEHLDVYDTSGPYTDDAADIDVERGLPR MRDSWQRPEPVDGASTQLAWARAGVVTDEMRFVAARENVDVELVRSEVAAGRAVIPVNHRHPESEPMIIGKAFAVKVNAN IGNSAVTSSIAEEVEKMVWATRWGADTIMDLSTGKDIHMTREWIMRNSPVPVGTVPIYQALEKVNGDPTRLTWEIYRDTV IEQAEQGVDYMTVHAGVLLRYVPLTARRVTGIVSRGGSIMAAWCLAHHQESFLYTNFDELCEIFRRYDITFSLGDGLRPG SIADANDEAQFAELRTLGELTTIAKSYGVQVMIEGPGHVPMHKIAENVRLEEEYCEEAPFYTLGPLATDIAPAYDHITSA IGAAMIAQAGTAMLCYVTPKEHLGLPNRDDVKVGVITYKIAAHSADLSKGHPRAQERDDALSKARFEFRWTDQFNLALDP DTAREYHDETLPAEPAKTAHFCSMCGPKFCSMRISADVRAYAEENNLVTAEDIDRKIAEEMAAKSAEFAESGNRVYLPLE TAGSTTDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 8e-166 | 61 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 8e-166 | 61 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 3e-156 | 59 |
