Gene Information

Name : Gbro_0646 (Gbro_0646)
Accession : YP_003271865.1
Strain : Gordonia bronchialis DSM 43247
Genome accession: NC_013441
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 707610 - 708422 bp
Length : 813 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dac:Daci_3149 ABC transporter

DNA sequence : 
ATGACGACGATCACCTCCCGACTCGGCGCCGACGGGGTCACCCTGGCCTACGGTGGTGCGCCGATCTCCCGAGACCTCAC
CGTGCAGATCCCGGACAACGAGTTCACGGTGATCATCGGCCCCAACGCATGCGGGAAATCGACTCTGCTGCGGGCGTTGT
CGCGGCTGCTGGCGCCCACGGCCGGGACGATCATCCTCGACGGCAAGGCCATCGGTGACTACCCAGCGAAGGACGTCGCC
CGGCGACTGGCCCTGCTGCCGCAGTCGTCGATTCCGCCCGAGGACATCCGGGTGGCCGAACTGGTCTCGCGCGGACGGTA
CCCGCATCAGCGATTTCTCCGGCAGTGGTCGCACGCCGACGAGGAGGCGGTGGCCGCGGCGATGGCCGCCACCGGCGTCG
AACACCTGGCCGGCGAACGAGTGGACCGGCTCTCCGGTGGTCAACGCCAGCGTGTCTGGGTGGCGCTCGTACTCGCGCAG
GACACGCCGCTCGTGCTGCTCGACGAGCCGACCACGTTCCTCGACATTGCTTTTCAGGTAGAGCTCCTCGACCTCTGCCG
TGACCTCAACCGGGATCGCGGCCGCACCGTGGTGGCGGTTCTGCACGACCTCAATCAGGCATGCCGGTACGCCGATCACA
TCATCGCGATGAACAAGGGACAGATCGTGGCGGCCGGACCACCCGCCGAGATCGTCACGGAGACCCTGGTGGAAGAGGTC
TTCGGGCTGCGCTGCCAGATCATCGACGACCCGCAGTCACATACGCCGCTGATCGTTCCGCGGGTGGCGGCCGGTTTCGG
CGGTGGGCGGTGA

Protein sequence : 
MTTITSRLGADGVTLAYGGAPISRDLTVQIPDNEFTVIIGPNACGKSTLLRALSRLLAPTAGTIILDGKAIGDYPAKDVA
RRLALLPQSSIPPEDIRVAELVSRGRYPHQRFLRQWSHADEEAVAAAMAATGVEHLAGERVDRLSGGQRQRVWVALVLAQ
DTPLVLLDEPTTFLDIAFQVELLDLCRDLNRDRGRTVVAVLHDLNQACRYADHIIAMNKGQIVAAGPPAEIVTETLVEEV
FGLRCQIIDDPQSHTPLIVPRVAAGFGGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-52 56
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-52 56
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-52 55
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 55
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-49 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-47 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-47 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-38 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbro_0646 YP_003271865.1 ABC transporter-like protein BAC0164 Protein 6e-39 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbro_0646 YP_003271865.1 ABC transporter-like protein VFG0925 Protein 1e-61 59
Gbro_0646 YP_003271865.1 ABC transporter-like protein VFG1042 Protein 6e-39 46