Gene Information

Name : Gbro_0645 (Gbro_0645)
Accession : YP_003271864.1
Strain : Gordonia bronchialis DSM 43247
Genome accession: NC_013441
Putative virulence/resistance : Virulence
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 706531 - 707613 bp
Length : 1083 bp
Strand : +
Note : PFAM: transporter permease; KEGG: yen:YE3620 iron-enterobactin transporter permease

DNA sequence :
ATGAGCGGGCACATCGACTCATCCCCGACGCCGGCGGAGAGCATCGACTTCGGGCGGGCGACGCTGCGGTGGCGCTGGCG
CGGGTACTCGCTACGCACCGACCGGCGGGCGTTCGTGGTGGCCACCGCGCTGGCGATCATCACCGTCGTCACGACGGTGA
TCGCGCTGGGCGCAGGGGATTACACCGTGTCACCGCTCGACGTGATCCGGGCCGCCTTCGGCGCCGGCGACCCGGCCGCA
CAACTCGCGATCCGCGAGTGGCAGGCACCGCGGGTGGTGGCAGCACTCGCCTTCGGCGCGGCACTGGCGTTGTCCGGGGC
CATCTTTCAGCTGCTGACCCGCAACCCGTTGGGCAGCCCGGACATCATCGGCTTCGGCGTCGGCTCCTACACCGGCGCCC
TGGTGGTGTCGGTGGTGCTGTCCGGGACGTATCTGATGACCGCGGCCGGGGCGCTGGCCGGCGGGCTGCTGACCGCGGTG
GTGGTGTACGCGTTGGCGTTCCGGCAGGGGGTGAGCGGTTTTCGGCTGGTCATCATCGGTGTCGCGATCAGCGCCATGCT
GTCGGCCGCCAACTATTGGCTGATCCTGCGTGCCGAACTCACCGACGCCATGAATGCCGCCCAGTGGGGCGCAGGCAATC
TGAGCACTGTCACCTGGGATCTGCTCACCCCGGCGCTCGCCGTGATCGCGGTGCTCATCGTCGGCGTGGCGATGCTGGCG
CGCCGAAATCCGATCCTCGAACTCGGGCCCGATCTCGGGCAGACGCTGGGTGCGCAGACCCGTGCTGTGCAGATCCTGCT
CCCAACGCTGGGGGTGGCTTTGACCGCAGCGGCGACAGCGGTGGCCGGGCCGATCGCGTTCATCGCGTTGTCGTCACCAC
ACATCGCGCGCCGGCTCGTCGGAGGTGGACAGACCCCGCTGGCCGCCACCGCGCTCACCGGGTCGTCGTTGTTGTTGATC
AGCGATCTCATTGCGGCCCGCGCCTTCTCGCCGAAGGTGCTGCCGGTCGGTGTGGTGACTGTGTGCCTGGGCGGCTGCTA
TCTGTGCTACCTGTTGTATCGCGAATTGAGGCAGGACCGATGA

Protein sequence :
MSGHIDSSPTPAESIDFGRATLRWRWRGYSLRTDRRAFVVATALAIITVVTTVIALGAGDYTVSPLDVIRAAFGAGDPAA
QLAIREWQAPRVVAALAFGAALALSGAIFQLLTRNPLGSPDIIGFGVGSYTGALVVSVVLSGTYLMTAAGALAGGLLTAV
VVYALAFRQGVSGFRLVIIGVAISAMLSAANYWLILRAELTDAMNAAQWGAGNLSTVTWDLLTPALAVIAVLIVGVAMLA
RRNPILELGPDLGQTLGAQTRAVQILLPTLGVALTAAATAVAGPIAFIALSSPHIARRLVGGGQTPLAATALTGSSLLLI
SDLIAARAFSPKVLPVGVVTVCLGGCYLCYLLYRELRQDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-21 46
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-21 46
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 1e-21 46
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 4e-21 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbro_0645 YP_003271864.1 transporter permease VFG0928 Protein 8e-21 46