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Name : Gbro_0620 (Gbro_0620) Accession : YP_003271841.1 Strain : Gordonia bronchialis DSM 43247 Genome accession: NC_013441 Putative virulence/resistance : Virulence Product : AMP-dependent synthetase and ligase Function : - COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism COG ID : COG1021 EC number : - Position : 657421 - 659109 bp Length : 1689 bp Strand : - Note : PFAM: AMP-dependent synthetase and ligase; KEGG: vvy:VVA1306 vulnibactin-specific 2,3- dihydroxybenzoate-AMP ligase DNA sequence : ATGCCCGATCAACCGACCGTCGAGTCGACGCCGACAGCTGTGACCACCGGTTTCGTCCCCCGTCCCGCCGACTTCATCGA CCGGTATCGCGCGCGCGGTTGCTACCTCGACGCCCCACTGTGGCAGTTGTTGGACGACGCCGCGACATCGTCTCCGGACA GCCCCGCCCTCACCGACCCGGGCGCCCAACCGCCACGCACCTTGACCTACGCAGCACTTCTTGCGGCCACCCGCCGTCGT GCCGGGGGTTTCCTGCGCGCCGGGCTGCGGCCGGGGCAGCGCGTCGTGGTGCAACAGAACAACACCGCGGAACTCGTCGT CAACGTGTTCGCCCTGATGCGAGCCGGGTTGCTGCCGGTCATGGCGCTACCGGCGCACCGTCGAGCCGAGATCACCCACC TTGCACGCACCTCCGGTGCCAGCGCCTACGTGACCGAGGACGGTCGGCACGGCTTCGATCATCGAACGCTGGCAACCGAT CTCGTCGACGACGTGGAGTCCCTCGCGCACGTCTTCATCGACGGTGACCCAGGCGGGTTCCTGCCCTTGCCGGACGCGGA CGGCGTCGAGTTGCCGAGCGCCGACGGGATCGACGCGAATCTGCCGGCTCTCTTCCTGATCTCCGGCGGCACCACGGGCC TGCCCAAGCTGATCCCCCGCACGCACAACGACTACTCGTTCAACGCCCGACGATCCGCCGAGATCGCCGGGTTGGTCGAC ACCGACGTCTACCTCGTAGCGCTTCCCGGGGCGCATAACTTCCCGCTGTGCTGTCCCGGCATGCTGGGGGTGATCTCGAC GGGCGGGCACATCGTGCTGGGAACCGATCCGAGTCCCGACGCCGCCTTCGACCTCATCGAGACCTACGGCGTCACGGTGA CCGCCCTCGTCCCCGCCCTTGCCCAGGTCTGGTGTGCTGCAACGGAATGGGAGCCCGCCGACATCAGTTCGCTGCGTTTG TTGCAAGTGGGCGGCGCGAAGCTGGCCGAGCCCGACGCCGTCGCGCTCGACGCCGCACTCGGCGACGTCGTGCAGCAGGT GTTCGGCATGGCCGAGGGACTGATCTGCTACACGCGACTCGACGATCCGCGTGAACTCGTCCACACCACGCAGGGCCGAC CCATGTCCGACGACGACGAGTTGCGCGTGGTCGATGAGTCGGGTGTCGACGTGCCGGTGGGCACCGAGGGCGAACTGTTG GTGCGCGGGCCGTACACGATCCGCGGCTACTACCGGGCCGACGACCACAACACCCGGTCGTTCACCGACGACGGCTTCTA TCGGTCCGGCGACCGCGTACGCGTCCTGCCGTCCGGACACGTCGCCGTGACCGGGCGCATCAAGGACACCATCGTGCGGG CCGGCGAGAACGTGGCCGCCGACGATGTGGAGGAAAGCCTGCTCGCCCACCCGTCGATTCGCCAGGTGGCGGTCATCGGA TTACCCGATGACTCACTCGGAGAACGTATCTGCGCGGTCGTGGTACCCACCGACGGGCCGAAATCGCCGGCCGCCGACCT TCGCACCCTGCGGACCTTCCTCACCGATCAGGGCGTGGCCCCTTTCAAGCTCCCCGATCAGGTGATCGTGGCCACCCGCC TTCCGGTCACACCGGTCGGCAAGATCGACAAACGTGCGCTGGTCGAGGAGTTCACCGCGGCCCCGCCGACCTCCCCTCCT GCCGGTTGA Protein sequence : MPDQPTVESTPTAVTTGFVPRPADFIDRYRARGCYLDAPLWQLLDDAATSSPDSPALTDPGAQPPRTLTYAALLAATRRR AGGFLRAGLRPGQRVVVQQNNTAELVVNVFALMRAGLLPVMALPAHRRAEITHLARTSGASAYVTEDGRHGFDHRTLATD LVDDVESLAHVFIDGDPGGFLPLPDADGVELPSADGIDANLPALFLISGGTTGLPKLIPRTHNDYSFNARRSAEIAGLVD TDVYLVALPGAHNFPLCCPGMLGVISTGGHIVLGTDPSPDAAFDLIETYGVTVTALVPALAQVWCAATEWEPADISSLRL LQVGGAKLAEPDAVALDAALGDVVQQVFGMAEGLICYTRLDDPRELVHTTQGRPMSDDDELRVVDESGVDVPVGTEGELL VRGPYTIRGYYRADDHNTRSFTDDGFYRSGDRVRVLPSGHVAVTGRIKDTIVRAGENVAADDVEESLLAHPSIRQVAVIG LPDDSLGERICAVVVPTDGPKSPAADLRTLRTFLTDQGVAPFKLPDQVIVATRLPVTPVGKIDKRALVEEFTAAPPTSPP AG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ybtE | CAA21394.1 | - | Virulence | HPI | Protein | 5e-94 | 47 |
| ybtE | YP_853079.1 | yersiniabactin siderophore biosynthetic protein | Virulence | PAI IV APEC-O1 | Protein | 3e-94 | 47 |
| irp5 | YP_001006819.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 3e-94 | 47 |
| ybtE | AAA93464.1 | yersiniabactin 2,3-dihydoxybenzoate-AMP ligase | Virulence | HPI | Protein | 4e-94 | 47 |
| irp5 | CAA73130.1 | Irp5 protein | Virulence | HPI | Protein | 2e-94 | 47 |
| irp5 | YP_002346898.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 5e-94 | 47 |
| ybtE | NP_669710.1 | salicyl-AMP ligase | Virulence | HPI | Protein | 5e-94 | 47 |
| ybtE | NP_993003.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 5e-94 | 47 |
| ybtE | YP_070120.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 5e-94 | 47 |
| irp2E | YP_005163485.1 | siderophore biosynthetic protein | Virulence | Not named | Protein | 7e-71 | 41 |
| irp2E | YP_005134497.1 | siderophore biosynthetic protein | Virulence | Not named | Protein | 6e-71 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Gbro_0620 | YP_003271841.1 | AMP-dependent synthetase and ligase | VFG1817 | Protein | 5e-112 | 51 |
| Gbro_0620 | YP_003271841.1 | AMP-dependent synthetase and ligase | VFG0168 | Protein | 4e-94 | 47 |
