Name : Gbro_4732 (Gbro_4732) Accession : YP_003275744.1 Strain : Gordonia bronchialis DSM 43247 Genome accession: NC_013441 Putative virulence/resistance : Unknown Product : integrase catalytic domain-containing protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 5064236 - 5065165 bp Length : 930 bp Strand : - Note : PFAM: Integrase catalytic region; KEGG: aav:Aave_2937 integrase catalytic subunit DNA sequence : TTGATCGTCGAGTACATCGACGATCACAGGGACAGGTTCGGGGTCGATCCGATCTGCCGGGTACTCACCGAGTACGGAAT GCAGATTGCCCCATCCACCTACTATGCCCACAAGCAGCGTGGCCTGGTCTCGGCAGCGATGCTCGAGGAGGCCTACGCCG CTCATGCCGTCTACCAGCAGTTCGAGAAGAACCGCGGTGTGTACGGGGTGCGCAAGATGTATCACACGATGTGGCGCGCC GGTCACGTGATGGGTCGTGATCAGGTCGGCCGGCTGATGGGGATCTGCGGCATCTCCGGTGCTGTACGCGGCAGCCATCG CACCACCACGACCCACCGAGACGATAGGGCGCCACGATTCCCTGATCATGTTGAACGACAATGGGATACACCGACACATC CGGATCAGTGGTGGGTGGCCGACTTCACGTATGTGTGGACATTGGCGGGGTTTGTCTACGTCGCGTTCCTCGTGGATGTG TTTTCGCGACGCATCCTCGGGTGGCGAGTCATGGCGAGCAAGCACACACCGTTGGTGACGAGTGTTGTCGAGCAAGCGTT GTTCGTCCGCCGCCGATCCGGATTCGACTTCACCGCAACCGGTTTGGTTCATCACAGCGATGCGGGCAGTCAGTACACAT CGTTGGCATTCACCGCTGCGCTGACCGAGGCCAACATCACCGGATCCATAGGATCGGTCGGCGATGCGCTCGACAACGCG CTCATGGAGTCGGCGATCGGCTTGTACAAGACCGAACTGATCGACACCGGCCGCGCCTGGAAGGACCGCGGCGAGGTCGA ACGAGAGACCGCCGCCTACGTGCACTGGTTCAACGCCGAGAGGCTGCACTCCTCCCTGGGCTACTGCTCACCCGTCGAGT ACGAGACGCGCTATCGTGACAGCGTCGCCTCCGTGGCGGAGGTGGCCTGA Protein sequence : MIVEYIDDHRDRFGVDPICRVLTEYGMQIAPSTYYAHKQRGLVSAAMLEEAYAAHAVYQQFEKNRGVYGVRKMYHTMWRA GHVMGRDQVGRLMGICGISGAVRGSHRTTTTHRDDRAPRFPDHVERQWDTPTHPDQWWVADFTYVWTLAGFVYVAFLVDV FSRRILGWRVMASKHTPLVTSVVEQALFVRRRSGFDFTATGLVHHSDAGSQYTSLAFTAALTEANITGSIGSVGDALDNA LMESAIGLYKTELIDTGRAWKDRGEVERETAAYVHWFNAERLHSSLGYCSPVEYETRYRDSVASVAEVA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
S4063 | NP_839232.1 | IS629 orfB | Not tested | SHI-2 | Protein | 1e-34 | 48 |
Z4334 | NP_289559.1 | IS629 transposase | Not tested | OI-122 | Protein | 4e-35 | 48 |
unnamed | AAL67406.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 1e-38 | 47 |
unnamed | AAL67398.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 2e-42 | 43 |
c5213 | NP_757061.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 2e-42 | 43 |
c5178 | NP_757026.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 3e-42 | 43 |
ORF_34 | AAZ04444.1 | putative IS629 transposase | Not tested | PAI I APEC-O1 | Protein | 8e-42 | 43 |
APECO1_3499 | YP_854312.1 | transposase for IS629 | Not tested | PAI I APEC-O1 | Protein | 1e-41 | 43 |
Z1660 | NP_287162.1 | transposase for IS629 | Not tested | TAI | Protein | 5e-42 | 43 |
Z1198 | NP_286733.1 | transposase | Not tested | TAI | Protein | 4e-42 | 43 |
Z1638 | NP_287141.1 | transposase | Not tested | TAI | Protein | 4e-42 | 43 |
Z1221 | NP_286756.1 | transposase | Not tested | TAI | Protein | 3e-42 | 43 |
IS629 | CAI43840.1 | transposase for IS629 | Not tested | LEE | Protein | 1e-40 | 43 |
c5167 | NP_757015.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 2e-28 | 42 |
unnamed | CAD42083.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 2e-41 | 42 |
ECO111_3721 | YP_003236061.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 1e-42 | 42 |
ECO111_3776 | YP_003236111.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 1e-42 | 42 |
IS629 | CAC37926.1 | transposase for IS629 | Not tested | LEE | Protein | 2e-40 | 42 |
IS629 | CAI43821.1 | transposase for IS629 | Not tested | LEE | Protein | 2e-40 | 42 |
IS629 | CAI43909.1 | transposase for IS629 1 | Not tested | LEE | Protein | 2e-40 | 42 |
ECO103_3585 | YP_003223443.1 | IS629 transposase OrfB | Not tested | LEE | Protein | 3e-40 | 42 |
tnp7109-25 | YP_001800853.1 | transposase for insertion sequence | Not tested | Not named | Protein | 3e-43 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Gbro_4732 | YP_003275744.1 | integrase catalytic domain-containing protein | VFG1602 | Protein | 9e-42 | 42 |