Gene Information

Name : Gbro_4473 (Gbro_4473)
Accession : YP_003275499.1
Strain : Gordonia bronchialis DSM 43247
Genome accession: NC_013441
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4791960 - 4792835 bp
Length : 876 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pla:Plav_1100 ABC transporter

DNA sequence :
ATGATCGCCAGTGACCCGGCCACGACCGGCCACGTGACCACGTCCACCGTCGCGGCCGGTGCCGAGAACCTCGTCAAGCG
TTACGGTTCGGGTGATACCGCCGTGGAAGCGCTTCGCGGCGTGACAATCTCGTTCCGGGCCGGCGAGTTCACCGCCATCA
TGGGGCCGTCGGGGTCGGGGAAATCCACCCTGATGCACTGCCTCGCCGGACTCGACGTGGCCAGCGGTGGGCGGGTGCAC
ATCGGTGACGTCGACCTCACGGCGCTGTCCGACAAGAACATGACGATGCTGCGACGCGACCGCATCGGCTTCGTCTTCCA
GTCGTTCAACCTGGTCCCGACGCTGACCGCAGCCGAGAACATCACACTGCCCGTCGACATCGCCGGCCGCAAGGTGGACA
CCGCGTGGTTCGACGCCGTCGTCGACCGCCTCGGCATCACCGATCGCCTCGGTCATCTACCCAGCGAACTGTCCGGCGGA
CAGCAGCAGCGCGTCGCGTGCGCACGAGCGCTGATCGGCAAGCCGTCGATCATCTTCGGCGACGAGCCGACCGGCAACCT
GGATTCCCGATCGTCGGGCGAGGTACTGAACATCCTGCGCGCGGCCACCGACGAGTTCGGGCAGACCGTCGTGATCGTCA
CCCACGATCCGCGGGCCGCCTCCTACGCCGACCGCGTCGTCTTCCTCGCCGACGGTCAGATCGTGCGGGAACTCATCCGT
CCCAGCGCCGACGACGTCTTCGAGGTGATGCGCCATCTCGACGATCCGCCCGCCGCGGCCGACCCGGTTGTTGCAGAGGC
CGCGATCACCACCGGGAGCACCGGGCGCCACGCGGCCCCCGAGGTCCCCGACGCCGGCACCACCGAGGCGCGCTGA

Protein sequence :
MIASDPATTGHVTTSTVAAGAENLVKRYGSGDTAVEALRGVTISFRAGEFTAIMGPSGSGKSTLMHCLAGLDVASGGRVH
IGDVDLTALSDKNMTMLRRDRIGFVFQSFNLVPTLTAAENITLPVDIAGRKVDTAWFDAVVDRLGITDRLGHLPSELSGG
QQQRVACARALIGKPSIIFGDEPTGNLDSRSSGEVLNILRAATDEFGQTVVIVTHDPRAASYADRVVFLADGQIVRELIR
PSADDVFEVMRHLDDPPAAADPVVAEAAITTGSTGRHAAPEVPDAGTTEAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-42 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-42 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-42 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbro_4473 YP_003275499.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-45 47
Gbro_4473 YP_003275499.1 ABC transporter-like protein NC_008702.1.4606598. Protein 6e-35 47
Gbro_4473 YP_003275499.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-49 46
Gbro_4473 YP_003275499.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-42 42