Gene Information

Name : Gbro_4223 (Gbro_4223)
Accession : YP_003275268.1
Strain : Gordonia bronchialis DSM 43247
Genome accession: NC_013441
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4522833 - 4523606 bp
Length : 774 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rec:RHECIAT_PC0000768 short chain dehydrogenase/reductase protein

DNA sequence :
ATGAACAGCATCCAACGCACCGCCGTCATCACCGGCGCCACCTCCCCGCGCGGCATCGGCCGTGAGGTCGCCCGCCGCTA
CGCCGAAGAAGGCTGGGCCATCGTCATTCTCGACCTCGACGGCGAACTGTCCGCCAAGGTCGCCGCGGAGATCGGCAACC
AGTACGCGGTGCCCGCCTTCGGCGCCGATATCGACGTCACCGACGAGGCGTCGGTCGCCGCGGCCCAGGCAGCGGTGGCC
GCCGAGGTCGCGAGCGGCAACCTGCCGGTGGTGGGTGCGCTCGCCAACATCGCCGGCATCACCTCGCCGGTGCCGTTCCT
CGAGACCACCCTGGACCTCTGGAACAAGGTGATGGCCGTCAACGCGACCGGAACCTACCTGGTCACCAAGGCCTTCCTGC
CCGCCATGATCGACGCCGGTTTCGGGCGCATCGTCAACATGTCGTCGGTGTCCGCGCAGCGCGGCGGCGGTGTCTTCGGC
AAGGTGCCCTACTCGTCGGCCAAGGCCGCGATCCTCGGATTCACCAAATCCCTTGCCCGCGAACTCGGTACCACCGGTGT
CACGGTCAACGCGGTGACCCCGGGCGCGGTCGACACCGACATCCGCGTCGGCTCCACCGACGAGCAGGAAGCCGCGCTCG
CGGCGTCGATCCCGGTGGCGCGCACCGCGACCACCACCGAGGTCGCGGCCGCGATCACCTTCTTGTCCAGCGAGGACGCC
GCCTACCTGACCGGCACCACCCTCGACATCAACGGCGGCAGCCACATGCACTGA

Protein sequence :
MNSIQRTAVITGATSPRGIGREVARRYAEEGWAIVILDLDGELSAKVAAEIGNQYAVPAFGADIDVTDEASVAAAQAAVA
AEVASGNLPVVGALANIAGITSPVPFLETTLDLWNKVMAVNATGTYLVTKAFLPAMIDAGFGRIVNMSSVSAQRGGGVFG
KVPYSSAKAAILGFTKSLARELGTTGVTVNAVTPGAVDTDIRVGSTDEQEAALAASIPVARTATTTEVAAAITFLSSEDA
AYLTGTTLDINGGSHMH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 6e-31 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 3e-31 42
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 2e-31 42
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-31 42
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 3e-32 42