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Name : Gbro_4080 (Gbro_4080) Accession : YP_003275138.1 Strain : Gordonia bronchialis DSM 43247 Genome accession: NC_013441 Putative virulence/resistance : Unknown Product : integrase catalytic domain-containing protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 4381364 - 4382317 bp Length : 954 bp Strand : - Note : PFAM: Integrase catalytic region; KEGG: hypothetical protein DNA sequence : GTGGAGTTCATCCGCACTCACCAGGGACACCAGGTGGGTGCGGATGGCCTTGTCTGGGGCGTCGATTCGATGTGCGCCGT GCTCTGCGAGCATGGTATCCACATCGCCCCGTCCACTTACTATGATCACATCAACCGCGGGCCGAGCGCCCGCATGTTCG CCGATGCGCAGGTCATCGATGCGATCTTCGCTTTGCGCCGGAAGCGACCGCTGATGCGGGTTCTGGGTTCACGCAAGACA TGGATAGTATTGCGCAGCAGTGGTATTGATGTTGCTCGATGCACTGTTGAACGAGTGATGCGGGAGATGGGATGGCATGG CGCGAGTAAGAAGAAGCGAGTGCGTACGACCATCCCTGATGCGGCAGCGTCGCGGCCGGCGGATCTGGTCGACAGACAGT TCTATGCTGCGGCACCAAATCGGTTGTGGGTAGCCGATTTTACCTACTGCCGCACCAAGTCGGGGTGGGCGTACACGGCG TTCGTCATCGATGTGTTCGCCCGCAAGATTGTCGGCTGGAAAGTGGCCTCGGAAATGACAGTGAACCTGGTTACCGATGC CATCAACAACGCGATAGACAACCGAAAGCGTTGCGGTGTAGTTGATTTAACGAGACTCATACACCATTCAGACGCGGGAT CGCAGTACACAGCGATTGTGTTCGGGCAGCGGTTGGCCGAGGAAGGCATCGCGGCTTCTATTGGCAGCGTTGGGGATAGC TACGACAACGCGCTCGCGGAGTCGGTGAACTCTGACTACAAGAACGAACTCGTCGACAACCAGCCGCGATTTCACGGCGC GACCGAACTGTCACTGGGCACGGCCGAATGGGTGGCGTTCTACAACCGTGAACGCCCACACAGTTACTGCGACGACCTCA CCCCCGACCACGCTGAGCGACTCCATTACGATCACATGCGCACCCTCAATCCGGAGGGGGCACTCACAACCTGA Protein sequence : MEFIRTHQGHQVGADGLVWGVDSMCAVLCEHGIHIAPSTYYDHINRGPSARMFADAQVIDAIFALRRKRPLMRVLGSRKT WIVLRSSGIDVARCTVERVMREMGWHGASKKKRVRTTIPDAAASRPADLVDRQFYAAAPNRLWVADFTYCRTKSGWAYTA FVIDVFARKIVGWKVASEMTVNLVTDAINNAIDNRKRCGVVDLTRLIHHSDAGSQYTAIVFGQRLAEEGIAASIGSVGDS YDNALAESVNSDYKNELVDNQPRFHGATELSLGTAEWVAFYNRERPHSYCDDLTPDHAERLHYDHMRTLNPEGALTT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL67406.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 3e-39 | 47 |
| c5167 | NP_757015.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 9e-31 | 45 |
| tnp7109-25 | YP_001800853.1 | transposase for insertion sequence | Not tested | Not named | Protein | 9e-40 | 45 |
| c5178 | NP_757026.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 8e-41 | 44 |
| ECO111_3721 | YP_003236061.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 7e-41 | 44 |
| ECO111_3776 | YP_003236111.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 7e-41 | 44 |
| Z1660 | NP_287162.1 | transposase for IS629 | Not tested | TAI | Protein | 9e-41 | 43 |
| Z1198 | NP_286733.1 | transposase | Not tested | TAI | Protein | 3e-40 | 43 |
| Z1638 | NP_287141.1 | transposase | Not tested | TAI | Protein | 3e-40 | 43 |
| Z1221 | NP_286756.1 | transposase | Not tested | TAI | Protein | 9e-41 | 43 |
| unnamed | AAL67398.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 2e-41 | 43 |
| IS629 | CAI43840.1 | transposase for IS629 | Not tested | LEE | Protein | 4e-39 | 42 |
| ORF_34 | AAZ04444.1 | putative IS629 transposase | Not tested | PAI I APEC-O1 | Protein | 5e-40 | 42 |
| APECO1_3499 | YP_854312.1 | transposase for IS629 | Not tested | PAI I APEC-O1 | Protein | 7e-40 | 42 |
| IS629 | CAI43909.1 | transposase for IS629 1 | Not tested | LEE | Protein | 7e-39 | 42 |
| c5213 | NP_757061.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 8e-41 | 42 |
| ECO103_3585 | YP_003223443.1 | IS629 transposase OrfB | Not tested | LEE | Protein | 3e-39 | 42 |
| unnamed | CAD42083.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 8e-38 | 42 |
| IS629 | CAC37926.1 | transposase for IS629 | Not tested | LEE | Protein | 7e-39 | 42 |
| IS629 | CAI43821.1 | transposase for IS629 | Not tested | LEE | Protein | 7e-39 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Gbro_4080 | YP_003275138.1 | integrase catalytic domain-containing protein | VFG1602 | Protein | 5e-38 | 42 |
