Gene Information

Name : Gbro_1957 (Gbro_1957)
Accession : YP_003273104.1
Strain : Gordonia bronchialis DSM 43247
Genome accession: NC_013441
Putative virulence/resistance : Unknown
Product : helicase
Function : -
COG functional category : K : Transcription
COG ID : COG1199
EC number : -
Position : 2065510 - 2067609 bp
Length : 2100 bp
Strand : -
Note : SMART: helicase; DEAD/DEAH box helicase; KEGG: mxa:MXAN_6717 ATP-dependent helicase

DNA sequence :
ATGTCACAACTTCCCTCGGTGACCGCGCTGCTCGACGCGGCCGTCACCGCCCTCGGCGGCGCTCGCCGCGACGGCCAGGT
CACGATGGCCTCTGCCGTGGCCCACGCCATCGACACCGGCGAACACCTGGCTGTGCAGGCCGGGACCGGCACGGGTAAGT
CGCTCGCCTATCTCGTTCCGGCCATCCGGCATGCCGTCGACAGTGGCCGTACCGTGGTGGTCTCCACGGCCACCATCGCC
CTGCAACGCCAGCTCATCGAACGGGACCTGCCGCGGCTGGCCGGCGCGCTCAAGGGTCCGCTCGGGCGCGAGCCCACCTT
CGCAATTCTCAAGGGGCGCGGAAATTACCTGTGCCTCAACAAGATTCACGCAGGTACCGCCGACGAACCGGATACCGAGC
TGTTCGATCCGTTCGAGCTGTCCCGGACCGGCCGGGAGGTGACGCGGCTGCGGGAGTGGAGCAGCGACACCGAAACCGGC
GACCGCGACGATCTCACCCCGGGCGTCAACGATCGCGCCTGGCGGCAGGTCAGCGTCACCGCCCGCGAGTGTCTGGGGGC
CGCGAACTGCTCCTACGGCGAGGACTGTTTCGCCGAGGTCGCGCGGCGTCGTTCGGCGAAGGTCGACGTCGTGGTGACCA
ACCATGCCCTGCTGTCCATCGACGCCACCAGCCCGGCCAGCATCCTGCCCGAACACGACGTGGTGATCATCGACGAGGCG
CACGAACTGGTGGACCGCATTACGTCGGTCTCCACCGCGGAGGTGTCGGCGGCAACCATCGCCCTCCTCGCGCGGCGATG
CGGGAAACTCGTCGACGAGGAGACCGTGGACGCGCTGGAGGCGGCCGGTGAGCAGTTCGGCGAGCTGCTCGCCGATGCCC
CGCATCGACAGTGGATGAGTCTGCCCGCCTCGGCGGCCAGTGTGTTGGTGGCGCTACGCGACCGGCTGTGGCAGACCCGC
ACGTCGATCGGGCCGATCCGGATGAGCGGGGCCGCCGACGAGTCGGCCGCCGCGGCCCGGTCTGCGGCGCTGACCTCCCT
GGACGAACTGCACGACACCATCGTCCGTCTCCTCGGCGCCTTCGACGAACCCGACGAGTCCAAACGTCGCGACGTCGTGT
GGGTCGCCGAGGAACGCACCTCGCGGTCGCCGTCGGCCGACACCCGCCCGGTCCTGCACATCGCCCCACTGTCGGTGGGC
GGCCTGCTGCGGGCGACCCTGTTCGCGCAGTCGACCGTCATCCTCACATCGGCCACGCTGGCCATCGGTGGCTCCTTCGA
CGCGCTCGCCGCGACCTGGGGACTGCCCGCGTCCGGTCGCGGCGCCGACACCCCGGCCGTCGACGCTCCCGCCGGCGCTG
GAGCGAATCCGGTGTCGGATGTCACCGCGTCGGGCAAGGCCGTTCCCCGCGATGAGCAGCGTGTCCGGTGGACCGGCCTG
GACGCCGGGTCCCCGTTCGATTACCCGCGCTCGGCCATCCTCTACGTCGCCCGGCATCTGCCGCGGCCGGGGCGTGACGG
CATCGCCGAGAAGACGATGACCGAGCTGGCCGAGCTCATCGACGCCGCGGGTGGCCGGACGTTAGGCTTGTTCTCGTCGA
TGCGCGCGGCGAAGGAGGCTGCCGAGGCGATCCGCGAGCGGTGTGATCACCCGGTTCTGTGTCAGGGCGAGGACACCACC
TCGTCGCTGGTCCGCCGGTTCACCGAGGACCCCCGGACATGTCTGTTCGGCACGCTGTCGCTGTGGCAGGGCGTCGATGT
GCCGGGGCCGTCGCTGAGCCTGGTGGTCATCGACCGCATTCCCTTTCCCCGGCCCGACGATCCGCTGCTGACCGCACGCC
AGCGTGCCGTCGACGCCCGGGGCGGCAACGGTTTCCTGTCGGTGGCGGCCAATCACGCGGCGCTGTTGCTGGCGCAGGGT
GCCGGGCGGCTCCTGCGATCGGTGGACGACCGCGGGGTCGTCGCCGTCCTCGACCCGCGGCTGGCGACCGCCGGTTACGG
CGGATACCTGATGGCGTCGTTGCCACCGTTCTGGCGGACCACCGATCCGGCGACCGTGCGCTCGGCACTCGCCCGGCTCA
CCAAGACCACCACGGCGTGA

Protein sequence :
MSQLPSVTALLDAAVTALGGARRDGQVTMASAVAHAIDTGEHLAVQAGTGTGKSLAYLVPAIRHAVDSGRTVVVSTATIA
LQRQLIERDLPRLAGALKGPLGREPTFAILKGRGNYLCLNKIHAGTADEPDTELFDPFELSRTGREVTRLREWSSDTETG
DRDDLTPGVNDRAWRQVSVTARECLGAANCSYGEDCFAEVARRRSAKVDVVVTNHALLSIDATSPASILPEHDVVIIDEA
HELVDRITSVSTAEVSAATIALLARRCGKLVDEETVDALEAAGEQFGELLADAPHRQWMSLPASAASVLVALRDRLWQTR
TSIGPIRMSGAADESAAAARSAALTSLDELHDTIVRLLGAFDEPDESKRRDVVWVAEERTSRSPSADTRPVLHIAPLSVG
GLLRATLFAQSTVILTSATLAIGGSFDALAATWGLPASGRGADTPAVDAPAGAGANPVSDVTASGKAVPRDEQRVRWTGL
DAGSPFDYPRSAILYVARHLPRPGRDGIAEKTMTELAELIDAAGGRTLGLFSSMRAAKEAAEAIRERCDHPVLCQGEDTT
SSLVRRFTEDPRTCLFGTLSLWQGVDVPGPSLSLVVIDRIPFPRPDDPLLTARQRAVDARGGNGFLSVAANHAALLLAQG
AGRLLRSVDDRGVVAVLDPRLATAGYGGYLMASLPPFWRTTDPATVRSALARLTKTTTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1474 YP_001800868.1 ATP-dependent DNA helicase Not tested Not named Protein 5e-122 52